RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 MAGEA1P43355 309 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 TNNT3P45378 269 aaPredicted RBP20.14■□□□□ 0.81
TDP2-202ENST00000378198 MAPK8IP2Q13387 824 aaPredicted RBP20.14■□□□□ 0.81
TDP2-202ENST00000378198 CCNI2Q6ZMN8 369 aaPredicted RBP20.14■□□□□ 0.81
TDP2-202ENST00000378198 CACNA2D4Q7Z3S7 1137 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 CREG2Q8IUH2 290 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 RUBCNQ92622 972 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 COA1Q9GZY4 146 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 NUCKS1Q9H1E3 243 aaKnown RBP20.14■□□□□ 0.81
TDP2-202ENST00000378198 PANK4Q9NVE7 773 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 CWC15Q9P013 229 aaKnown RBP20.14■□□□□ 0.81
TDP2-202ENST00000378198 HPCAL4Q9UM19 191 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 PCDHA12Q9UN75 941 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 COL4A3BPQ9Y5P4 624 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 CAPN6Q9Y6Q1 641 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 ZBTB5O15062 677 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 SLC26A4O43511 780 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 MOCS3O95396 460 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 TCP1P17987 556 aaKnown RBP20.14■□□□□ 0.81
TDP2-202ENST00000378198 LRRC41Q15345 812 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 ZCWPW2Q504Y3 356 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 SMCR8Q8TEV9 937 aaPredicted RBP20.14■□□□□ 0.81
TDP2-202ENST00000378198 COG1Q8WTW3 980 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 TANGO6Q9C0B7 1094 aa20.14■□□□□ 0.81
TDP2-202ENST00000378198 C2orf54Q08AI8 447 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 ECM1Q16610 540 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 FAM26FQ5R3K3 315 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 LEKR1Q6ZMV7 388 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 MTMR8Q96EF0 704 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 CEP63Q96MT8 703 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 GLT8D2Q9H1C3 349 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 MLXIPQ9HAP2 919 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 DDX4Q9NQI0 724 aaKnown RBP20.13■□□□□ 0.81
TDP2-202ENST00000378198 LRRC4BQ9NT99 713 aa20.13■□□□□ 0.81
TDP2-202ENST00000378198 KCNMA1Q12791 1236 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 ASTE1Q2TB18 679 aaPredicted RBP20.12■□□□□ 0.81
TDP2-202ENST00000378198 TTBK2Q6IQ55 1244 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 CLEC10AQ8IUN9 316 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 SP8Q8IXZ3 490 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 PSTPIP2Q9H939 334 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 CEP72Q9P209 647 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 HYOU1Q9Y4L1 999 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 TRAF5O00463 557 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 GNA14O95837 355 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 SHMT1P34896 483 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 CCDC40Q4G0X9 1142 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 CCDC65Q8IXS2 484 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 SYN2Q92777 582 aaPredicted RBP20.12■□□□□ 0.81
TDP2-202ENST00000378198 USP40Q9NVE5 1235 aa20.12■□□□□ 0.81
TDP2-202ENST00000378198 ATF5Q9Y2D1 282 aaPredicted RBP20.12■□□□□ 0.81
TDP2-202ENST00000378198 SYF2O95926 243 aaKnown RBP20.11■□□□□ 0.81
TDP2-202ENST00000378198 CAPN2P17655 700 aa20.11■□□□□ 0.81
TDP2-202ENST00000378198 RNF10Q8N5U6 811 aaKnown RBP20.11■□□□□ 0.81
TDP2-202ENST00000378198 CCDC155Q8N6L0 562 aa20.11■□□□□ 0.81
TDP2-202ENST00000378198 OSBPL9Q96SU4 736 aa20.11■□□□□ 0.81
TDP2-202ENST00000378198 USP17L10C9JJH3 530 aa20.11■□□□□ 0.81
TDP2-202ENST00000378198 RBAK-RBAKDNI3L0D1 243 aa20.11■□□□□ 0.81
TDP2-202ENST00000378198 GOLGA6L1Q8N7Z2 621 aa20.11■□□□□ 0.81
TDP2-202ENST00000378198 KLRG2A4D1S0 409 aaPredicted RBP20.1■□□□□ 0.81
TDP2-202ENST00000378198 F8W031 263 aaPredicted RBP20.1■□□□□ 0.81
TDP2-202ENST00000378198 PHACTR2O75167 634 aa20.1■□□□□ 0.81
TDP2-202ENST00000378198 RPS6KA5O75582 802 aa20.1■□□□□ 0.81
TDP2-202ENST00000378198 HLA-DOAP06340 250 aa20.1■□□□□ 0.81
TDP2-202ENST00000378198 MARSP56192 900 aaKnown RBP20.1■□□□□ 0.81
TDP2-202ENST00000378198 SLC9C1Q4G0N8 1177 aa20.1■□□□□ 0.81
TDP2-202ENST00000378198 HGSNATQ68CP4 663 aa20.1■□□□□ 0.81
TDP2-202ENST00000378198 SELENOOQ9BVL4 669 aa20.1■□□□□ 0.81
TDP2-202ENST00000378198 A0A0U1RQG5 324 aaPredicted RBP20.09■□□□□ 0.81
TDP2-202ENST00000378198 TULP2O00295 520 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 PPEF1O14829 653 aaPredicted RBP20.09■□□□□ 0.81
TDP2-202ENST00000378198 RIMBP2O15034 1052 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 RNF40O75150 1001 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 ZMYND10O75800 440 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 SERPING1P05155 500 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 SLC16A2P36021 539 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 SFMBT2Q5VUG0 894 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 SPATA4Q8NEY3 305 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 CRACR2AQ9BSW2 395 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 FAM204AQ9H8W3 233 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 TSKSQ9UJT2 592 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 FAM184BQ9ULE4 1060 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 KIF13BQ9NQT8 1826 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 SSBP05455 408 aaKnown RBP eCLIP20.09■□□□□ 0.81
TDP2-202ENST00000378198 IVLP07476 585 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 PAFAH1B1P43034 410 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 USP11P51784 963 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 ATP2B2Q01814 1243 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 GFPT1Q06210 699 aaPredicted RBP20.09■□□□□ 0.81
TDP2-202ENST00000378198 CCDC17Q96LX7 622 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 DRC1Q96MC2 740 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 NOX5Q96PH1 765 aa20.09■□□□□ 0.81
TDP2-202ENST00000378198 LUC7LQ9NQ29 371 aaKnown RBP20.09■□□□□ 0.81
TDP2-202ENST00000378198 ZC3H4Q9UPT8 1303 aaKnown RBP20.09■□□□□ 0.81
TDP2-202ENST00000378198 E9PMD0 336 aa20.08■□□□□ 0.81
TDP2-202ENST00000378198 MPHOSPH10O00566 681 aaKnown RBP20.08■□□□□ 0.81
TDP2-202ENST00000378198 PRPF6O94906 941 aaKnown RBP20.08■□□□□ 0.81
TDP2-202ENST00000378198 PLA2G4BP0C869 781 aa20.08■□□□□ 0.81
TDP2-202ENST00000378198 MYBL2P10244 700 aa20.08■□□□□ 0.81
TDP2-202ENST00000378198 TDRD12Q587J7 1177 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms