RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MRVI1Q9Y6F6 885 aa22.26■■□□□ 1.15
CBWD3-204ENST00000377349 U3KPZ7 1027 aaPredicted RBP22.26■■□□□ 1.15
CBWD3-204ENST00000377349 ZBTB5O15062 677 aa22.25■■□□□ 1.15
CBWD3-204ENST00000377349 CKBP12277 381 aa22.25■■□□□ 1.15
CBWD3-204ENST00000377349 BMP1P13497 986 aa22.25■■□□□ 1.15
CBWD3-204ENST00000377349 LAMC2Q13753 1193 aa22.25■■□□□ 1.15
CBWD3-204ENST00000377349 TMCO2Q7Z6W1 182 aaPredicted RBP22.25■■□□□ 1.15
CBWD3-204ENST00000377349 CCDC155Q8N6L0 562 aa22.25■■□□□ 1.15
CBWD3-204ENST00000377349 UHRF1Q96T88 793 aaPredicted RBP22.25■■□□□ 1.15
CBWD3-204ENST00000377349 LCHNA4D1U4 455 aa22.24■■□□□ 1.15
CBWD3-204ENST00000377349 LPXNO60711 386 aa22.24■■□□□ 1.15
CBWD3-204ENST00000377349 CYP21A2P08686 494 aa22.24■■□□□ 1.15
CBWD3-204ENST00000377349 DEFB103AP81534 67 aa22.24■■□□□ 1.15
CBWD3-204ENST00000377349 MFSD10Q14728 455 aa22.24■■□□□ 1.15
CBWD3-204ENST00000377349 MYSM1Q5VVJ2 828 aa22.24■■□□□ 1.15
CBWD3-204ENST00000377349 SENP2Q9HC62 589 aa22.24■■□□□ 1.15
CBWD3-204ENST00000377349 ERICH2A1L162 156 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 SGSM2O43147 1006 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 HOXA13P31271 388 aaPredicted RBP22.23■■□□□ 1.15
CBWD3-204ENST00000377349 SP2Q02086 613 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 MBTPS1Q14703 1052 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 PGM5Q15124 567 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 KIAA0753Q2KHM9 967 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 VSIG10LQ86VR7 867 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 SKAP1Q86WV1 359 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 ARNTL2Q8WYA1 636 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 NECAB3Q96P71 396 aaPredicted RBP22.23■■□□□ 1.15
CBWD3-204ENST00000377349 ALG1Q9BT22 464 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 MAP3K20Q9NYL2 800 aaKnown RBP22.23■■□□□ 1.15
CBWD3-204ENST00000377349 PCDHA1Q9Y5I3 950 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 TAF6LQ9Y6J9 622 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 MYO7AQ13402 2215 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 IFIT3O14879 490 aaKnown RBP22.23■■□□□ 1.15
CBWD3-204ENST00000377349 CYTH3O43739 400 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 ZNF200P98182 395 aaPredicted RBP22.23■■□□□ 1.15
CBWD3-204ENST00000377349 GRM4Q14833 912 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 HSDL1Q3SXM5 330 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 CNKSR3Q6P9H4 555 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 DHX37Q8IY37 1157 aaKnown RBP22.23■■□□□ 1.15
CBWD3-204ENST00000377349 C7orf31Q8N865 590 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 GPKOWQ92917 476 aaPredicted RBP eCLIP22.23■■□□□ 1.15
CBWD3-204ENST00000377349 KATNAL1Q9BW62 490 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 RIOX1Q9H6W3 641 aa22.23■■□□□ 1.15
CBWD3-204ENST00000377349 NLRC5Q86WI3 1866 aa22.22■■□□□ 1.15
CBWD3-204ENST00000377349 KIF28PB7ZC32 967 aa22.22■■□□□ 1.15
CBWD3-204ENST00000377349 TLL1O43897 1013 aa22.22■■□□□ 1.15
CBWD3-204ENST00000377349 MYCLP12524 364 aaPredicted RBP22.22■■□□□ 1.15
CBWD3-204ENST00000377349 KCNJ6P48051 423 aa22.22■■□□□ 1.15
CBWD3-204ENST00000377349 KCNQ1P51787 676 aa22.22■■□□□ 1.15
CBWD3-204ENST00000377349 PTK7Q13308 1070 aa22.22■■□□□ 1.15
CBWD3-204ENST00000377349 GRB10Q13322 594 aa22.22■■□□□ 1.15
CBWD3-204ENST00000377349 CELF3Q5SZQ8 465 aaKnown RBP22.22■■□□□ 1.15
CBWD3-204ENST00000377349 TSPYL2Q9H2G4 693 aaPredicted RBP22.22■■□□□ 1.15
CBWD3-204ENST00000377349 E7EWF7 191 aa22.21■■□□□ 1.15
CBWD3-204ENST00000377349 GTPBP6O43824 516 aaPredicted RBP22.21■■□□□ 1.15
CBWD3-204ENST00000377349 PARNO95453 639 aaKnown RBP22.21■■□□□ 1.15
CBWD3-204ENST00000377349 UBA1P22314 1058 aaKnown RBP22.21■■□□□ 1.15
CBWD3-204ENST00000377349 ZNF618Q5T7W0 954 aa22.21■■□□□ 1.15
CBWD3-204ENST00000377349 SAMD3Q8N6K7 520 aa22.21■■□□□ 1.15
CBWD3-204ENST00000377349 NCOA7Q8NI08 942 aa22.21■■□□□ 1.15
CBWD3-204ENST00000377349 ZFP91Q96JP5 570 aaPredicted RBP22.21■■□□□ 1.15
CBWD3-204ENST00000377349 PIGSQ96S52 555 aa22.21■■□□□ 1.15
CBWD3-204ENST00000377349 C16orf70Q9BSU1 422 aa22.21■■□□□ 1.15
CBWD3-204ENST00000377349 RBM8AQ9Y5S9 174 aaKnown RBP22.21■■□□□ 1.15
CBWD3-204ENST00000377349 ATG2AQ2TAZ0 1938 aa22.2■■□□□ 1.14
CBWD3-204ENST00000377349 SORBS3O60504 671 aa22.2■■□□□ 1.14
CBWD3-204ENST00000377349 PPFIA4O75335 1185 aa22.2■■□□□ 1.14
CBWD3-204ENST00000377349 GGPS1O95749 300 aa22.2■■□□□ 1.14
CBWD3-204ENST00000377349 MKRN4PQ13434 485 aaPredicted RBP22.2■■□□□ 1.14
CBWD3-204ENST00000377349 SART3Q15020 963 aaKnown RBP22.2■■□□□ 1.14
CBWD3-204ENST00000377349 HOMER1Q86YM7 354 aa22.2■■□□□ 1.14
CBWD3-204ENST00000377349 BCAS3Q9H6U6 928 aa22.2■■□□□ 1.14
CBWD3-204ENST00000377349 GJB5O95377 273 aa22.19■■□□□ 1.14
CBWD3-204ENST00000377349 HOXC8P31273 242 aa22.19■■□□□ 1.14
CBWD3-204ENST00000377349 TROAPQ12815 778 aa22.19■■□□□ 1.14
CBWD3-204ENST00000377349 WTAPQ15007 396 aa22.19■■□□□ 1.14
CBWD3-204ENST00000377349 KCNV1Q6PIU1 500 aa22.19■■□□□ 1.14
CBWD3-204ENST00000377349 SPATA33Q96N06 139 aa22.19■■□□□ 1.14
CBWD3-204ENST00000377349 FRMPD4Q14CM0 1322 aa22.19■■□□□ 1.14
CBWD3-204ENST00000377349 ABHD14A-ACY1A0A1B0GW23 586 aa22.18■■□□□ 1.14
CBWD3-204ENST00000377349 SERINC5Q86VE9 423 aa22.18■■□□□ 1.14
CBWD3-204ENST00000377349 TGFB3P10600 412 aa22.17■■□□□ 1.14
CBWD3-204ENST00000377349 COL9A1P20849 921 aa22.17■■□□□ 1.14
CBWD3-204ENST00000377349 SKIV2LQ15477 1246 aaKnown RBP22.17■■□□□ 1.14
CBWD3-204ENST00000377349 IL27Q8NEV9 243 aa22.17■■□□□ 1.14
CBWD3-204ENST00000377349 GDPD5Q8WTR4 605 aa22.17■■□□□ 1.14
CBWD3-204ENST00000377349 PIBF1Q8WXW3 757 aa22.17■■□□□ 1.14
CBWD3-204ENST00000377349 GCOM1H8Y6P7 765 aaPredicted RBP22.16■■□□□ 1.14
CBWD3-204ENST00000377349 POLR2MP0CAP2 368 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 CCND2P30279 289 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 ANTXR2P58335 489 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 MRPS9P82933 396 aaKnown RBP22.16■■□□□ 1.14
CBWD3-204ENST00000377349 SEMA3FQ13275 785 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 AAK1Q2M2I8 961 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 FCHSD1Q86WN1 690 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 RAD9AQ99638 391 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 ANO2Q9NQ90 1003 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 RAPGEFL1Q9UHV5 662 aa22.16■■□□□ 1.14
CBWD3-204ENST00000377349 PNMA6FA0A0J9YX94 578 aa22.15■■□□□ 1.14
CBWD3-204ENST00000377349 CENPQQ7L2Z9 268 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms