RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 CCNI2Q6ZMN8 369 aaPredicted RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 MRRFQ96E11 262 aaKnown RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 TTC1Q99614 292 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 SH2D4AQ9H788 454 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 QTRT2Q9H974 415 aaKnown RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 TMOD2Q9NZR1 351 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 NFU1Q9UMS0 254 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 BCL9O00512 1426 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 VWA3AA6NCI4 1184 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 KCNJ18B7U540 433 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 LIN7AO14910 233 aaPredicted RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 ANP32DO95626 131 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 BLVRAP53004 296 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 BASP1P80723 227 aaKnown RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 KCNJ12Q14500 433 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 TTLL11Q8NHH1 800 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 ENOX1Q8TC92 643 aaKnown RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 A1CFQ9NQ94 594 aaKnown RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 C2CD2Q9Y426 696 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 ADGRG1Q9Y653 693 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 MGEA5O60502 916 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 JAK2O60674 1132 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 VHLP40337 213 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 FKBP4Q02790 459 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 TBL3Q12788 808 aaKnown RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 THEMIS2Q5TEJ8 643 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 NUGGCQ68CJ6 796 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 IRGCQ6NXR0 463 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 ZNF554Q86TJ5 538 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 NELFBQ8WX92 580 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 TEKT1Q969V4 418 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 TRAPPC9Q96Q05 1148 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 BPIFA3Q9BQP9 254 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 ZNF446Q9NWS9 450 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 NDE1Q9NXR1 346 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 CORO1CQ9ULV4 474 aaPredicted RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 BTAF1O14981 1849 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 KCNK3O14649 394 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 ARID5AQ03989 594 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 MKRN3Q13064 507 aaKnown RBP4.41□□□□□ -1.7
PTAR1-202ENST00000377200 PARP10Q53GL7 1025 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 ANKRD35Q8N283 1001 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 PIGBQ92521 554 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 RAB34Q9BZG1 259 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 FGFR1OP2Q9NVK5 253 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 ATP6V0A2Q9Y487 856 aa4.41□□□□□ -1.7
PTAR1-202ENST00000377200 MAPK13O15264 365 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 RAD21O60216 631 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 COPB1P53618 953 aaKnown RBP4.4□□□□□ -1.7
PTAR1-202ENST00000377200 PSMD6Q15008 389 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 TMEM67Q5HYA8 995 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 GJC2Q5T442 439 aaPredicted RBP4.4□□□□□ -1.7
PTAR1-202ENST00000377200 RIN2Q8WYP3 895 aaPredicted RBP4.4□□□□□ -1.7
PTAR1-202ENST00000377200 CATSPER2Q96P56 530 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 WDR24Q96S15 920 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 AZI2Q9H6S1 392 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 ASIC3Q9UHC3 531 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 DBNLQ9UJU6 430 aaKnown RBP4.4□□□□□ -1.7
PTAR1-202ENST00000377200 RGL2O15211 777 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 PPP2R5EQ16537 467 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 MCMDC2Q4G0Z9 681 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 MICU3Q86XE3 530 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 SYT2Q8N9I0 419 aaPredicted RBP4.4□□□□□ -1.7
PTAR1-202ENST00000377200 PRPF31Q8WWY3 499 aaKnown RBP4.4□□□□□ -1.7
PTAR1-202ENST00000377200 TRIM11Q96F44 468 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 CCDC138Q96M89 665 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 MYD88Q99836 296 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 DKK3Q9UBP4 350 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 L1RE1Q9UN81 338 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 ATP11BQ9Y2G3 1177 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 PALLDQ8WX93 1383 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 ERVV-1B6SEH8 477 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 RASGRF2O14827 1237 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 MCF2P10911 925 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 NQO1P15559 274 aaKnown RBP4.4□□□□□ -1.7
PTAR1-202ENST00000377200 SEC24CP53992 1094 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 CUL1Q13616 776 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 SFMBT2Q5VUG0 894 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 CCDC105Q8IYK2 499 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 CSGALNACT2Q8N6G5 542 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 WDR60Q8WVS4 1066 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 EZH1Q92800 747 aaPredicted RBP4.4□□□□□ -1.7
PTAR1-202ENST00000377200 NDEL1Q9GZM8 345 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 ZSWIM6Q9HCJ5 1215 aa4.4□□□□□ -1.7
PTAR1-202ENST00000377200 CCT8L1PA6NM43 557 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 ZBTB43O43298 467 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 ESRRAP11474 423 aaPredicted RBP4.4□□□□□ -1.71
PTAR1-202ENST00000377200 LMNB1P20700 586 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 KLHL30Q0D2K2 578 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 MAP3K12Q12852 859 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 KRT40Q6A162 431 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 KRT80Q6KB66 452 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.4□□□□□ -1.71
PTAR1-202ENST00000377200 CCDC82Q8N4S0 544 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 RNPC3Q96LT9 517 aaKnown RBP4.4□□□□□ -1.71
PTAR1-202ENST00000377200 RUNDC3BQ96NL0 473 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 SBF2Q86WG5 1849 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 LOC102724428A0A0B4J2F2 783 aa4.4□□□□□ -1.71
PTAR1-202ENST00000377200 SART1O43290 800 aaKnown RBP4.4□□□□□ -1.71
PTAR1-202ENST00000377200 APOEP02649 317 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms