RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 KIAA1217Q5T5P2 1943 aa26.9■■□□□ 1.9
C9orf47-202ENST00000375850 STAM2O75886 525 aa26.9■■□□□ 1.9
C9orf47-202ENST00000375850 RGS20O76081 388 aa26.9■■□□□ 1.9
C9orf47-202ENST00000375850 IKBKEQ14164 716 aa26.9■■□□□ 1.9
C9orf47-202ENST00000375850 TTC22Q5TAA0 569 aa26.9■■□□□ 1.9
C9orf47-202ENST00000375850 RALYLQ86SE5 291 aaKnown RBP26.9■■□□□ 1.9
C9orf47-202ENST00000375850 CERS4Q9HA82 394 aa26.9■■□□□ 1.9
C9orf47-202ENST00000375850 LMCD1Q9NZU5 365 aa26.9■■□□□ 1.9
C9orf47-202ENST00000375850 IFIT3O14879 490 aaKnown RBP26.89■■□□□ 1.9
C9orf47-202ENST00000375850 NBNO60934 754 aa26.89■■□□□ 1.9
C9orf47-202ENST00000375850 GGPS1O95749 300 aa26.89■■□□□ 1.9
C9orf47-202ENST00000375850 ZNF286BP0CG31 522 aa26.89■■□□□ 1.9
C9orf47-202ENST00000375850 GNPTABQ3T906 1256 aa26.89■■□□□ 1.9
C9orf47-202ENST00000375850 HOMER1Q86YM7 354 aa26.89■■□□□ 1.9
C9orf47-202ENST00000375850 PNMA6FA0A0J9YX94 578 aa26.88■■□□□ 1.89
C9orf47-202ENST00000375850 RFXAPO00287 272 aa26.88■■□□□ 1.89
C9orf47-202ENST00000375850 GJB5O95377 273 aa26.88■■□□□ 1.89
C9orf47-202ENST00000375850 BMP1P13497 986 aa26.88■■□□□ 1.89
C9orf47-202ENST00000375850 HOXA13P31271 388 aaPredicted RBP26.88■■□□□ 1.89
C9orf47-202ENST00000375850 TRIM71Q2Q1W2 868 aaKnown RBP26.88■■□□□ 1.89
C9orf47-202ENST00000375850 NCOA7Q8NI08 942 aa26.88■■□□□ 1.89
C9orf47-202ENST00000375850 RAD9AQ99638 391 aa26.88■■□□□ 1.89
C9orf47-202ENST00000375850 IL25Q9H293 177 aa26.88■■□□□ 1.89
C9orf47-202ENST00000375850 MLXIPQ9HAP2 919 aa26.88■■□□□ 1.89
C9orf47-202ENST00000375850 MUC3AQ02505 3323 aa26.87■■□□□ 1.89
C9orf47-202ENST00000375850 CYP21A2P08686 494 aa26.87■■□□□ 1.89
C9orf47-202ENST00000375850 UBA1P22314 1058 aaKnown RBP26.87■■□□□ 1.89
C9orf47-202ENST00000375850 WTAPQ15007 396 aa26.87■■□□□ 1.89
C9orf47-202ENST00000375850 HSDL1Q3SXM5 330 aa26.87■■□□□ 1.89
C9orf47-202ENST00000375850 PIGSQ96S52 555 aa26.87■■□□□ 1.89
C9orf47-202ENST00000375850 EPOPA6NHQ4 379 aa26.86■■□□□ 1.89
C9orf47-202ENST00000375850 GSPT1P15170 499 aaKnown RBP26.86■■□□□ 1.89
C9orf47-202ENST00000375850 GRB10Q13322 594 aa26.86■■□□□ 1.89
C9orf47-202ENST00000375850 MYH6P13533 1939 aa26.86■■□□□ 1.89
C9orf47-202ENST00000375850 LGR5O75473 907 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 ARHGEF15O94989 841 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 TROAPQ12815 778 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 NEDD9Q14511 834 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 ZNF618Q5T7W0 954 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 TRAF7Q6Q0C0 670 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 CATIPQ7Z7H3 387 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 SERINC5Q86VE9 423 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 C16orf70Q9BSU1 422 aa26.85■■□□□ 1.89
C9orf47-202ENST00000375850 CAND2O75155 1236 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 ICAM3P32942 547 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 DEFB103AP81534 67 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 FCHSD1Q86WN1 690 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 IL31RAQ8NI17 732 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 HLA-CQ95604 372 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 YTHDC1Q96MU7 727 aaKnown RBP26.84■■□□□ 1.89
C9orf47-202ENST00000375850 TGS1Q96RS0 853 aaKnown RBP26.84■■□□□ 1.89
C9orf47-202ENST00000375850 MAP3K14Q99558 947 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 USP26Q9BXU7 913 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 TET1Q8NFU7 2136 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 FRMPD4Q14CM0 1322 aa26.84■■□□□ 1.89
C9orf47-202ENST00000375850 TRANK1O15050 2925 aa26.83■■□□□ 1.89
C9orf47-202ENST00000375850 C17orf102A2RUQ5 167 aa26.83■■□□□ 1.89
C9orf47-202ENST00000375850 H3BRB1 525 aa26.83■■□□□ 1.89
C9orf47-202ENST00000375850 NOP56O00567 594 aaKnown RBP26.83■■□□□ 1.89
C9orf47-202ENST00000375850 CHMLP26374 656 aa26.83■■□□□ 1.89
C9orf47-202ENST00000375850 SP2Q02086 613 aa26.83■■□□□ 1.89
C9orf47-202ENST00000375850 TFF2Q03403 129 aa26.83■■□□□ 1.89
C9orf47-202ENST00000375850 INPP4AQ96PE3 977 aaPredicted RBP26.83■■□□□ 1.89
C9orf47-202ENST00000375850 TUT1Q9H6E5 874 aaKnown RBP26.83■■□□□ 1.89
C9orf47-202ENST00000375850 RSPH10B2B2RC85 870 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 E7EWF7 191 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 CYTH3O43739 400 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 RSPH10BP0C881 870 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 GNAT1P11488 350 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 PDE4AP27815 886 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 HOXC8P31273 242 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 ERVK-21P61565 698 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 SLC35G1Q2M3R5 365 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 XRRA1Q6P2D8 792 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 METTL7BQ6UX53 244 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 MTA3Q9BTC8 594 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 INSL6Q9Y581 213 aa26.82■■□□□ 1.88
C9orf47-202ENST00000375850 PRRC2BQ5JSZ5 2229 aaKnown RBP26.81■■□□□ 1.88
C9orf47-202ENST00000375850 TRIP12Q14669 1992 aaPredicted RBP26.81■■□□□ 1.88
C9orf47-202ENST00000375850 LCHNA4D1U4 455 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 FIBPO43427 364 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 LPXNO60711 386 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 AMHP03971 560 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 SMARCA1P28370 1054 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 KIF5BP33176 963 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 THPOP40225 353 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 ATP6V0A1Q93050 837 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 C1QTNF1Q9BXJ1 281 aa26.81■■□□□ 1.88
C9orf47-202ENST00000375850 NCOR1O75376 2440 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 LGALS2P05162 132 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 COL9A1P20849 921 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 ZNF200P98182 395 aaPredicted RBP26.8■■□□□ 1.88
C9orf47-202ENST00000375850 PTH1RQ03431 593 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 MBTPS1Q14703 1052 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 CUL5Q93034 780 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 WNT8BQ93098 351 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 LZTS2Q9BRK4 669 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 SPZ1Q9BXG8 430 aa26.8■■□□□ 1.88
C9orf47-202ENST00000375850 ZNF215Q9UL58 517 aaPredicted RBP26.8■■□□□ 1.88
C9orf47-202ENST00000375850 LINC01553A4QN01 128 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms