RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 CCDC170Q8IYT3 715 aa16.83■□□□□ 0.28
MSH5-203ENST00000375750 MMTAG2Q9BU76 263 aaKnown RBP16.83■□□□□ 0.28
MSH5-203ENST00000375750 DEF6Q9H4E7 631 aa16.83■□□□□ 0.28
MSH5-203ENST00000375750 KANSL2Q9H9L4 492 aa16.83■□□□□ 0.28
MSH5-203ENST00000375750 SUGT1Q9Y2Z0 365 aa16.83■□□□□ 0.28
MSH5-203ENST00000375750 LRRC53A6NM62 1247 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 RASA1P20936 1047 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 MCM3P25205 808 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 GNGT1P63211 74 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 MICALL1Q8N3F8 863 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
MSH5-203ENST00000375750 USP40Q9NVE5 1235 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 TMEM260Q9NX78 707 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 RASSF7Q02833 373 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 TTMPQ5BVD1 217 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 NUP58Q9BVL2 599 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 RBM12Q9NTZ6 932 aaKnown RBP16.82■□□□□ 0.28
MSH5-203ENST00000375750 ROBO3Q96MS0 1386 aa16.82■□□□□ 0.28
MSH5-203ENST00000375750 ANO9A1A5B4 782 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 AKR1B10O60218 316 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 TXKP42681 527 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 ATP1A2P50993 1020 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 TRADDQ15628 312 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 ENOX2Q16206 610 aaKnown RBP16.81■□□□□ 0.28
MSH5-203ENST00000375750 HAUS3Q68CZ6 603 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 GJA10Q969M2 543 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 SIK3Q9Y2K2 1263 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 JRKLQ9Y4A0 524 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 TACC1O75410 805 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 FAM153BP0C7A2 387 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 NAP1L1P55209 391 aaKnown RBP16.81■□□□□ 0.28
MSH5-203ENST00000375750 FAM153CQ494X1 144 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 ZNF662Q6ZS27 426 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 C16orf86Q6ZW13 317 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 POTEDQ86YR6 584 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 BCAS4Q8TDM0 211 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 IPO4Q8TEX9 1081 aaKnown RBP16.81■□□□□ 0.28
MSH5-203ENST00000375750 RPGRIP1Q96KN7 1286 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 NLRC4Q9NPP4 1024 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 TCP11L1Q9NUJ3 509 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 BIN2Q9UBW5 565 aaPredicted RBP16.81■□□□□ 0.28
MSH5-203ENST00000375750 FAM153AQ9UHL3 310 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 DLEC1Q9Y238 1755 aa16.81■□□□□ 0.28
MSH5-203ENST00000375750 OR52Z1P0C646 297 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 SLC1A4P43007 532 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 GRM4Q14833 912 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 APOBEC3HQ6NTF7 200 aaKnown RBP16.8■□□□□ 0.28
MSH5-203ENST00000375750 MMGT1Q8N4V1 131 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 ERGIC2Q96RQ1 377 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 CAPS2Q9BXY5 557 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 NDST4Q9H3R1 872 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 PACSIN2Q9UNF0 486 aaPredicted RBP16.8■□□□□ 0.28
MSH5-203ENST00000375750 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 MYMKA6NI61 221 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 SHOX2O60902 331 aaPredicted RBP16.8■□□□□ 0.28
MSH5-203ENST00000375750 KRT14P02533 472 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 NAPAP54920 295 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 PDCLQ13371 301 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 VWA3BQ502W6 1294 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 ZSCAN29Q8IWY8 852 aaPredicted RBP16.8■□□□□ 0.28
MSH5-203ENST00000375750 PROCA1Q8NCQ7 364 aaPredicted RBP16.8■□□□□ 0.28
MSH5-203ENST00000375750 TRIM58Q8NG06 486 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 PLAGL2Q9UPG8 496 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
MSH5-203ENST00000375750 BICDL2A1A5D9 508 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 MAGEA1P43355 309 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 PTPROQ16827 1216 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 DACT2Q5SW24 774 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 CCDC181Q5TID7 509 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 USP17L2Q6R6M4 530 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 DNAAF5Q86Y56 855 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 NOC3LQ8WTT2 800 aaKnown RBP16.79■□□□□ 0.28
MSH5-203ENST00000375750 KAT2BQ92831 832 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 NUDT12Q9BQG2 462 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 TMEM47Q9BQJ4 181 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
MSH5-203ENST00000375750 CRKP46108 304 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 RETREG2Q8NC44 543 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 IFT81Q8WYA0 676 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 C7orf25Q9BPX7 421 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 TLR10Q9BXR5 811 aa16.79■□□□□ 0.28
MSH5-203ENST00000375750 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 GLI1P08151 1106 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 CARSP49589 748 aaKnown RBP16.78■□□□□ 0.28
MSH5-203ENST00000375750 RBM5P52756 815 aaKnown RBP eCLIP16.78■□□□□ 0.28
MSH5-203ENST00000375750 CACNB3P54284 484 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 NFIAQ12857 509 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 STRIP1Q5VSL9 837 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 EFCC1Q9HA90 598 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 SH3GLB2Q9NR46 395 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 FAM169AQ9Y6X4 670 aa16.78■□□□□ 0.28
MSH5-203ENST00000375750 FTCDO95954 541 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms