RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SYT1P21579 422 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 NKX3-2P78367 333 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 NEK8Q86SG6 692 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 CYP2W1Q8TAV3 490 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 U2AF1L4Q8WU68 220 aaKnown RBP12.93□□□□□ -0.34
HSPG2-202ENST00000374676 MBOAT7Q96N66 472 aa12.93□□□□□ -0.34
HSPG2-202ENST00000374676 NAP1L4Q99733 375 aaKnown RBP12.93□□□□□ -0.34
HSPG2-202ENST00000374676 UPF3AQ9H1J1 476 aaKnown RBP12.93□□□□□ -0.34
HSPG2-202ENST00000374676 IGLV3-22A0A075B6J6 115 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 FAM205CA6NFA0 338 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 KIF28PB7ZC32 967 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 GJA9P57773 515 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 SP2Q02086 613 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 MTMR1Q13613 665 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 GNL2Q13823 731 aaKnown RBP12.92□□□□□ -0.34
HSPG2-202ENST00000374676 NEDD9Q14511 834 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 LY6KQ17RY6 165 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 Q4G0T1 1027 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 TMEM63BQ5T3F8 832 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 PPP4R3AQ6IN85 833 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 PLA2G4DQ86XP0 818 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 ARRDC4Q8NCT1 418 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-202ENST00000374676 SPC25Q9HBM1 224 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 XPNPEP3Q9NQH7 507 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 KCNH7Q9NS40 1196 aa12.92□□□□□ -0.34
HSPG2-202ENST00000374676 DOCK5Q9H7D0 1870 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 DYNC1LI2O43237 492 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-202ENST00000374676 STX6O43752 255 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 ATP9AO75110 1047 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 ADAMTS4O75173 837 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 GH1P01241 217 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 TFRCP02786 760 aaKnown RBP12.91□□□□□ -0.34
HSPG2-202ENST00000374676 ARP10275 920 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 GCFC2P16383 781 aaKnown RBP12.91□□□□□ -0.34
HSPG2-202ENST00000374676 TRAPPC10P48553 1259 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 SETQ01105 290 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-202ENST00000374676 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 LETM2Q2VYF4 491 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 ANO1Q5XXA6 986 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 MCTP1Q6DN14 999 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 ANKLE1Q8NAG6 615 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 GIMAP8Q8ND71 665 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-202ENST00000374676 KLHDC9Q8NEP7 349 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 LENG9Q96B70 501 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 AP5M1Q9H0R1 490 aa12.91□□□□□ -0.34
HSPG2-202ENST00000374676 SYNRGQ9UMZ2 1314 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 CCDC85CA6NKD9 419 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 CTAGE5O15320 804 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 GGPS1O95749 300 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 KCNA2P16389 499 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 UBA1P22314 1058 aaKnown RBP12.9□□□□□ -0.34
HSPG2-202ENST00000374676 CST5P28325 142 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-202ENST00000374676 ARHGAP1Q07960 439 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 LRRC41Q15345 812 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 PRR16Q569H4 304 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 CELF3Q5SZQ8 465 aaKnown RBP12.9□□□□□ -0.34
HSPG2-202ENST00000374676 GJC2Q5T442 439 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-202ENST00000374676 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 RNF180Q86T96 592 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 TLK2Q86UE8 772 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
HSPG2-202ENST00000374676 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 COPS5Q92905 334 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 LENG1Q96BZ8 264 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-202ENST00000374676 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
HSPG2-202ENST00000374676 AGO4Q9HCK5 861 aaKnown RBP12.9□□□□□ -0.34
HSPG2-202ENST00000374676 MTMR6Q9Y217 621 aa12.9□□□□□ -0.34
HSPG2-202ENST00000374676 NFASCO94856 1347 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-202ENST00000374676 A6NJR5 290 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 MSH4O15457 936 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 CCNT1O60563 726 aaKnown RBP12.89□□□□□ -0.35
HSPG2-202ENST00000374676 TDP2O95551 362 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 PGK1P00558 417 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 ANP32AP39687 249 aaKnown RBP12.89□□□□□ -0.35
HSPG2-202ENST00000374676 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-202ENST00000374676 BRDTQ58F21 947 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-202ENST00000374676 CCSAPQ6IQ19 270 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-202ENST00000374676 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 BRAPQ7Z569 592 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 PCSK9Q8NBP7 692 aaKnown RBP12.89□□□□□ -0.35
HSPG2-202ENST00000374676 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 MLXIPQ9HAP2 919 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 TBC1D22BQ9NU19 505 aa12.89□□□□□ -0.35
HSPG2-202ENST00000374676 NOL7Q9UMY1 257 aaKnown RBP12.89□□□□□ -0.35
HSPG2-202ENST00000374676 IPO5O00410 1097 aaKnown RBP12.88□□□□□ -0.35
HSPG2-202ENST00000374676 TBX3O15119 743 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 DHX15O43143 795 aaKnown RBP12.88□□□□□ -0.35
HSPG2-202ENST00000374676 ZEB2O60315 1214 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 FARP2O94887 1054 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-202ENST00000374676 C6orf222P0C671 652 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-202ENST00000374676 EN2P19622 333 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-202ENST00000374676 PTGS1P23219 599 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-202ENST00000374676 CPT1AP50416 773 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 ITGB3BPQ13352 177 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms