RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 PLCD1P51178 756 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 RASSF7Q02833 373 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 CUL3Q13618 768 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 DDB1Q16531 1140 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 FBXW10Q5XX13 1052 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 MSL1Q68DK7 614 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 ZCCHC8Q6NZY4 707 aaKnown RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 FOXP4Q8IVH2 680 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 CCDC170Q8IYT3 715 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 DCLK2Q8N568 766 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 TNFRSF25Q93038 417 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 KIFC2Q96AC6 838 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 CLIC6Q96NY7 704 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 TCHPQ9BT92 498 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 LRP2BPQ9P2M1 347 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 TUBGCP4Q9UGJ1 667 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 SCINQ9Y6U3 715 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 SEC31AO94979 1220 aaKnown RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 FERP16591 822 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 KRT2P35908 639 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 BCAMP50895 628 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 GOLGA8FQ08AF8 430 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 GOLGA8DPQ0D2H9 430 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 TC2NQ8N9U0 490 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 ZNF304Q9HCX3 659 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 SH3GLB2Q9NR46 395 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 TNKSO95271 1327 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 SPATA31A5Q5VU36 1347 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 SPATA31A7Q8IWB4 1347 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 LINC00854A0A1B0GVQ3 168 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 TBKBP1A7MCY6 615 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 BMP6P22004 513 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 HOXD11P31277 338 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 HSPA1LP34931 641 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 BTG3Q14201 252 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 LONRF1Q17RB8 773 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 CAVIN4Q5BKX8 364 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 MEX3CQ5U5Q3 659 aaKnown RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 EMC10Q5UCC4 262 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 CAPRIN2Q6IMN6 1127 aaKnown RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 CCSAPQ6IQ19 270 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 FBXO33Q7Z6M2 555 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 NDUFAF2Q8N183 169 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 ZFAND2BQ8WV99 257 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 ANKS1AQ92625 1134 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 CTAGE1Q96RT6 745 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 WDR24Q96S15 920 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 NRDE2Q9H7Z3 1164 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 SEC31BQ9NQW1 1179 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 PAIP2BQ9ULR5 123 aaKnown RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 NFE2L3Q9Y4A8 694 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 ROBO3Q96MS0 1386 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 ITIH6Q6UXX5 1313 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 COL4A1P02462 1669 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 A0A1B0GTH6 734 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 TRIM75PA6NK02 468 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 FAM25EA8MYX2 175 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 LSM1O15116 133 aaKnown RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 CYP7A1P22680 504 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 FECHP22830 423 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 LIG3P49916 1009 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 KIF11P52732 1056 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 TUBB4BP68371 445 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 THOC7Q6I9Y2 204 aaKnown RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 IQCEQ6IPM2 695 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 WDR75Q8IWA0 830 aaKnown RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 SYCP3Q8IZU3 236 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 RBM46Q8TBY0 533 aaKnown RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 ZMAT2Q96NC0 199 aaKnown RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 PANX2Q96RD6 677 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 NAP1L3Q99457 506 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-201ENST00000373386 SYNCQ9H7C4 482 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 ATP6V0A4Q9HBG4 840 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 ATP8A2Q9NTI2 1148 aa9.04□□□□□ -0.96
GARNL3-201ENST00000373386 CCDC151A5D8V7 595 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 POTEB2H3BUK9 544 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 PRKAB2O43741 272 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 ZEB2O60315 1214 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 RRM1P23921 792 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 GUCY1A2P33402 732 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 AKAP17AQ02040 695 aaKnown RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 TROAPQ12815 778 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 BIRC3Q13489 604 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 SMC1AQ14683 1233 aaKnown RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 NR1I3Q14994 352 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 BRD3Q15059 726 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 SEPT7Q16181 437 aaKnown RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 ARHGAP27Q6ZUM4 889 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 TOGARAM2Q6ZUX3 1019 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 CEP63Q96MT8 703 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 NIP7Q9Y221 180 aaKnown RBP eCLIP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 TNRC6CQ9HCJ0 1690 aaKnown RBP9.03□□□□□ -0.96
GARNL3-201ENST00000373386 SASH3O75995 380 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 ADAMTS2O95450 1211 aa9.03□□□□□ -0.96
GARNL3-201ENST00000373386 RXRAP19793 462 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms