RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 THAP9Q9H5L6 903 aa13.29□□□□□ -0.28
NCDN-202ENST00000373243 SNUPNO95149 360 aaKnown RBP13.28□□□□□ -0.28
NCDN-202ENST00000373243 TCP10Q12799 353 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 IFT88Q13099 833 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 KCNB1Q14721 858 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 USH1GQ495M9 461 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 ARL6IP4Q66PJ3 421 aaKnown RBP13.28□□□□□ -0.28
NCDN-202ENST00000373243 CCDC65Q8IXS2 484 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 TMEM47Q9BQJ4 181 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 BRIP1Q9BX63 1249 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 PICK1Q9NRD5 415 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 KCND1Q9NSA2 647 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 PKD2L1Q9P0L9 805 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 PCDHA12Q9UN75 941 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 CETN3O15182 167 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 BTDP43251 543 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 PAK2Q13177 524 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 C11orf91Q3C1V1 193 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 PREPLQ4J6C6 727 aaPredicted RBP13.28□□□□□ -0.28
NCDN-202ENST00000373243 FAM26FQ5R3K3 315 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 SYCP3Q8IZU3 236 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 KIAA1024Q9UPX6 916 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 FAM205AQ6ZU69 1335 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 CNTNAP5Q8WYK1 1306 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 MEIS1O00470 390 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 BACH1O14867 736 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 GPBP1Q86WP2 473 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 KSR1Q8IVT5 923 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 ZNF34Q8IZ26 560 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 CTNNBL1Q8WYA6 563 aaPredicted RBP13.28□□□□□ -0.28
NCDN-202ENST00000373243 BAIAP2L1Q9UHR4 511 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 DMGDHQ9UI17 866 aaKnown RBP13.28□□□□□ -0.28
NCDN-202ENST00000373243 CAPN11Q9UMQ6 739 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
NCDN-202ENST00000373243 INHBEP58166 350 aa13.27□□□□□ -0.28
NCDN-202ENST00000373243 ZC3H12AQ5D1E8 599 aaKnown RBP13.27□□□□□ -0.28
NCDN-202ENST00000373243 MFSD14BQ5SR56 506 aa13.27□□□□□ -0.28
NCDN-202ENST00000373243 VGLL2Q8N8G2 317 aa13.27□□□□□ -0.28
NCDN-202ENST00000373243 WDR66Q8TBY9 1149 aa13.27□□□□□ -0.28
NCDN-202ENST00000373243 AP1M1Q9BXS5 423 aa13.27□□□□□ -0.28
NCDN-202ENST00000373243 GOLPH3Q9H4A6 298 aa13.27□□□□□ -0.28
NCDN-202ENST00000373243 PANK4Q9NVE7 773 aa13.27□□□□□ -0.28
NCDN-202ENST00000373243 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.28
NCDN-202ENST00000373243 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.28
NCDN-202ENST00000373243 BUB1BO60566 1050 aaPredicted RBP13.27□□□□□ -0.29
NCDN-202ENST00000373243 FGFR2P21802 821 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 ARHGAP25P42331 645 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 NNTQ13423 1086 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 VWA3BQ502W6 1294 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 THEMIS2Q5TEJ8 643 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 SPATA4Q8NEY3 305 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 SLC4A9Q96Q91 983 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 LRRC27Q9C0I9 530 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 TRAF1Q13077 416 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 SF3B2Q13435 895 aaKnown RBP13.27□□□□□ -0.29
NCDN-202ENST00000373243 MAN2A1Q16706 1144 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 DPP8Q6V1X1 898 aaPredicted RBP13.27□□□□□ -0.29
NCDN-202ENST00000373243 CCDC121Q6ZUS5 278 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 DAAM2Q86T65 1068 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 HDAC7Q8WUI4 952 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 NSUN4Q96CB9 384 aaKnown RBP13.27□□□□□ -0.29
NCDN-202ENST00000373243 ZNF512BQ96KM6 892 aaPredicted RBP13.27□□□□□ -0.29
NCDN-202ENST00000373243 TRIM9Q9C026 710 aa13.27□□□□□ -0.29
NCDN-202ENST00000373243 TDP2O95551 362 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 KRT14P02533 472 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 SLC1A4P43007 532 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 MRPL12P52815 198 aaKnown RBP13.26□□□□□ -0.29
NCDN-202ENST00000373243 ADAM9Q13443 819 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 KRT71Q3SY84 523 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 CCDC170Q8IYT3 715 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 OSBPL9Q96SU4 736 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 SCNN1DP51172 638 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 HERVK_113P62684 666 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 GTF2IP78347 998 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 NT5DC1Q5TFE4 455 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 PEX26Q7Z412 305 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 DNAAF5Q86Y56 855 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 NYXQ9GZU5 481 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 DDX20Q9UHI6 824 aaKnown RBP13.26□□□□□ -0.29
NCDN-202ENST00000373243 PCDHA6Q9UN73 950 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 PCDHA8Q9Y5H6 950 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 CAPN6Q9Y6Q1 641 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 OVOS2A0A0G2JMS6 1433 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 PABPC4Q13310 644 aaKnown RBP eCLIP13.26□□□□□ -0.292e-11■■■□□ 19
NCDN-202ENST00000373243 ARHGAP44Q17R89 818 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 KCTD1Q719H9 257 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 U2AF1L4Q8WU68 220 aaKnown RBP13.26□□□□□ -0.29
NCDN-202ENST00000373243 DDX12PQ92771 950 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 BORCS6Q96GS4 357 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 PSMD1Q99460 953 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 HPCAL4Q9UM19 191 aa13.26□□□□□ -0.29
NCDN-202ENST00000373243 CHD2O14647 1828 aaKnown RBP13.26□□□□□ -0.29
NCDN-202ENST00000373243 TOM1O60784 492 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 PALMO75781 387 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 CTNNA1P35221 906 aaKnown RBP13.25□□□□□ -0.29
NCDN-202ENST00000373243 PDXDC2PQ6P474 469 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 TRIM74Q86UV6 250 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 TRIM73Q86UV7 250 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 STIM2Q9P246 746 aa13.25□□□□□ -0.29
NCDN-202ENST00000373243 FAM237AA0A1B0GTK4 181 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms