RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 GPCPD1Q9NPB8 672 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 V9GY48 417 aaPredicted RBP7.18□□□□□ -1.26
CHD6-203ENST00000373233 TNKSO95271 1327 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 WDR19Q8NEZ3 1342 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 IQCA1LA6NCM1 817 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 CORO7P57737 925 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 PPP2R5BQ15173 497 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 ALX1Q15699 326 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 RAB34Q9BZG1 259 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 HVCN1Q96D96 273 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 HOMER3Q9NSC5 361 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 ATP8A2Q9NTI2 1148 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 EXOC1Q9NV70 894 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 TSKSQ9UJT2 592 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 TJP1Q07157 1748 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 ANKRD20A3Q5VUR7 823 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 FNBP4Q8N3X1 1017 aaPredicted RBP7.18□□□□□ -1.26
CHD6-203ENST00000373233 TRIM31Q9BZY9 425 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 RGL1Q9NZL6 768 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 SAR1BQ9Y6B6 198 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 TTLL12Q14166 644 aaPredicted RBP7.18□□□□□ -1.26
CHD6-203ENST00000373233 C17orf50Q8WW18 174 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 TBC1D23Q9NUY8 699 aa7.18□□□□□ -1.26
CHD6-203ENST00000373233 LRRIQ3A6PVS8 624 aaPredicted RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 NOP14P78316 857 aaKnown RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 CC2D1AQ6P1N0 951 aaPredicted RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 KLHL23Q8NBE8 558 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 hCG_1642624A0A1W2PR95 340 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 CTCFP49711 727 aaPredicted RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 CCDC15Q0P6D6 951 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 NNTQ13423 1086 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 BRIP1Q9BX63 1249 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 IL25Q9H293 177 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 SHANK3Q9BYB0 1731 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 TADA3O75528 432 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 TNNI2P48788 182 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 TFAP4Q01664 338 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 SEL1L2Q5TEA6 688 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 BTN2A1Q7KYR7 527 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 TBC1D1Q86TI0 1168 aaPredicted RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 UBA5Q9GZZ9 404 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 ANLNQ9NQW6 1124 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 INTUQ9ULD6 942 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 TAF1P21675 1872 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 NR1D1P20393 614 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 GJA8P48165 433 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 EIF6P56537 245 aaKnown RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 TCP10Q12799 353 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 SFSWAPQ12872 951 aaKnown RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 TNIP1Q15025 636 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 PSDA5PKW4 1024 aaPredicted RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 MCF2LO15068 1137 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 CFAP221Q4G0U5 840 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 SH3RF3Q8TEJ3 882 aaPredicted RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 USP17L8P0C7I0 530 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 ARID5AQ03989 594 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 DMPKQ09013 629 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 TDRD7Q8NHU6 1098 aaKnown RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 IQCDQ96DY2 449 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 KCNJ14Q9UNX9 436 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 MYO5AQ9Y4I1 1855 aaKnown RBP7.17□□□□□ -1.26
CHD6-203ENST00000373233 GNA11P29992 359 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 SLC8A3P57103 927 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 Q4G0T1 1027 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 CCDC93Q567U6 631 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 TMTC1Q8IUR5 882 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 ANKRD42Q8N9B4 389 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 P3H4Q92791 437 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 NDEL1Q9GZM8 345 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 MICAL3Q7RTP6 2002 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 LAMA4Q16363 1823 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 H0Y3Z8 333 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 PRR5LQ6MZQ0 368 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 APOA5Q6Q788 366 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 USP37Q86T82 979 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 SCYL3Q8IZE3 742 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 TCP11L1Q9NUJ3 509 aa7.17□□□□□ -1.26
CHD6-203ENST00000373233 ARHGAP10A1A4S6 786 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 DNAJC6O75061 913 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 GNAT1P11488 350 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 RNASE9P60153 205 aaKnown RBP7.16□□□□□ -1.26
CHD6-203ENST00000373233 DRP2Q13474 957 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 FANCBQ8NB91 859 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 CCDC51Q96ER9 411 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 COA1Q9GZY4 146 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 SPC25Q9HBM1 224 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 SERPINB3P29508 390 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 MCM7P33993 719 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 CALML4Q96GE6 196 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 SEPT10Q9P0V9 454 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 CTNND2Q9UQB3 1225 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 CCT6AP40227 531 aaKnown RBP7.16□□□□□ -1.26
CHD6-203ENST00000373233 MB21D2Q8IYB1 491 aaPredicted RBP7.16□□□□□ -1.26
CHD6-203ENST00000373233 FAM84BQ96KN1 310 aaPredicted RBP7.16□□□□□ -1.26
CHD6-203ENST00000373233 MYH1P12882 1939 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 MYH4Q9Y623 1939 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 WDR46O15213 610 aaKnown RBP7.16□□□□□ -1.26
CHD6-203ENST00000373233 TSGA10IPQ3SY00 556 aa7.16□□□□□ -1.26
CHD6-203ENST00000373233 PROCA1Q8NCQ7 364 aaPredicted RBP7.16□□□□□ -1.26
CHD6-203ENST00000373233 ERMNQ8TAM6 284 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms