RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SRRM3A6NNA2 597 aaPredicted RBP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ATP6V1G1O75348 118 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ATP6V1G2O95670 118 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 EPB41P11171 864 aaKnown RBP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 PDE6AP16499 860 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ZNF24P17028 368 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ADD1P35611 737 aaKnown RBP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ANTXR2P58335 489 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 SFMBT2Q5VUG0 894 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ILDR2Q71H61 639 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 TMC4Q7Z404 712 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 CCHCR1Q8TD31 782 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ZNF473Q8WTR7 871 aaKnown RBP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 STAMBPL1Q96FJ0 436 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ZNF570Q96NI8 536 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 EPN3Q9H201 632 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 NOD2Q9HC29 1040 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 SEC31BQ9NQW1 1179 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 MYO1AQ9UBC5 1043 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 PCDHGA11Q9Y5H2 935 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 LRP5O75197 1615 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 BCL9LQ86UU0 1499 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 WDR19Q8NEZ3 1342 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 MYH3P11055 1940 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 AKAP11Q9UKA4 1901 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 TCRBV5S4A2TA0A5A2 114 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 CBFA2T2O43439 604 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 SSBP05455 408 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 SLC5A1P13866 664 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 FDPSP14324 419 aaKnown RBP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ATP4AP20648 1035 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 SCNN1BP51168 640 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 EHHADHQ08426 723 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 MYBPC3Q14896 1274 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 NCAPHQ15003 741 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 PTPROQ16827 1216 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 TOGARAM2Q6ZUX3 1019 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 RALYLQ86SE5 291 aaKnown RBP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 VSTM4Q8IW00 320 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 SPATA5Q8NB90 893 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 SENP2Q9HC62 589 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 ZFATQ9P243 1243 aa9.77□□□□□ -0.85
ATG4A-203ENST00000372232 NIP7Q9Y221 180 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 MRPL42Q9Y6G3 142 aaKnown RBP9.77□□□□□ -0.85
ATG4A-203ENST00000372232 NWD2Q9ULI1 1742 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 A0A087WWV3 80 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 SNAP23O00161 211 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 NTSR2O95665 410 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 CCDC152Q4G0S7 254 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 GPR153Q6NV75 609 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 CCDC121Q6ZUS5 278 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 ENGASEQ8NFI3 743 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 CCDC148Q8NFR7 591 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 CNKSR1Q969H4 720 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 HPS5Q9UPZ3 1129 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 SUGT1Q9Y2Z0 365 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 NRAPQ86VF7 1730 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 CARMIL3Q8ND23 1372 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 hCG_2014768A0A024R1R8 64 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 KLF18A0A0U1RQI7 1052 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 TARSL2A2RTX5 802 aaKnown RBP9.76□□□□□ -0.85
ATG4A-203ENST00000372232 LRRC10BA6NIK2 292 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 GPR182O15218 404 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 DNAJC8O75937 253 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-203ENST00000372232 LUC7L3O95232 432 aaKnown RBP9.76□□□□□ -0.85
ATG4A-203ENST00000372232 USP14P54578 494 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 DAB2P98082 770 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 CCDC15Q0P6D6 951 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 IFT88Q13099 833 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 RIPK1Q13546 671 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 RASGRF1Q13972 1273 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 DSC3Q14574 896 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 GNPTABQ3T906 1256 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 LACTB2Q53H82 288 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-203ENST00000372232 NOA1Q8NC60 698 aaKnown RBP9.76□□□□□ -0.85
ATG4A-203ENST00000372232 STRBPQ96SI9 672 aaKnown RBP9.76□□□□□ -0.85
ATG4A-203ENST00000372232 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 ARPC5LQ9BPX5 153 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 PHACTR1Q9C0D0 580 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 USP21Q9UK80 565 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 ZNF510Q9Y2H8 683 aa9.76□□□□□ -0.85
ATG4A-203ENST00000372232 RTL9Q8NET4 1388 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 GOLGA8BA8MQT2 603 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 IKBKBO14920 756 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 KCNQ2O43526 872 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 ANP32DO95626 131 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 RACK1P63244 317 aaKnown RBP9.75□□□□□ -0.85
ATG4A-203ENST00000372232 TBX2Q13207 712 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-203ENST00000372232 PDCLQ13371 301 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 KARSQ15046 597 aaKnown RBP9.75□□□□□ -0.85
ATG4A-203ENST00000372232 EMC10Q5UCC4 262 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 ZNF772Q68DY9 489 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-203ENST00000372232 ATL3Q6DD88 541 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 POTEAQ6S8J7 498 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-203ENST00000372232 TBC1D10CQ8IV04 446 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 GOLPH3LQ9H4A5 285 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 SLC5A4Q9NY91 659 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 RCOR1Q9UKL0 485 aa9.75□□□□□ -0.85
ATG4A-203ENST00000372232 PHF24Q9UPV7 400 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms