RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 BTBD18B2RXH4 712 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 SPATA31C2B4DYI2 1134 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 PGK1P00558 417 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 GJA9P57773 515 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 NR5A1Q13285 461 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 LY6KQ17RY6 165 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 CEP55Q53EZ4 464 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 GJC2Q5T442 439 aaPredicted RBP18.14■□□□□ 0.49
PFDN4-201ENST00000371419 RNF180Q86T96 592 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 TBCKQ8TEA7 893 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 CDHR1Q96JP9 859 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 MXRA8Q9BRK3 442 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 UPF3AQ9H1J1 476 aaKnown RBP18.14■□□□□ 0.49
PFDN4-201ENST00000371419 FRMPD3Q5JV73 1810 aa18.14■□□□□ 0.49
PFDN4-201ENST00000371419 MAFGO15525 162 aa18.13■□□□□ 0.49
PFDN4-201ENST00000371419 DYNC1LI2O43237 492 aaPredicted RBP18.13■□□□□ 0.49
PFDN4-201ENST00000371419 ADAMTS4O75173 837 aa18.13■□□□□ 0.49
PFDN4-201ENST00000371419 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
PFDN4-201ENST00000371419 DDIT3P35638 169 aa18.13■□□□□ 0.49
PFDN4-201ENST00000371419 USP11P51784 963 aa18.13■□□□□ 0.49
PFDN4-201ENST00000371419 MTMR1Q13613 665 aa18.13■□□□□ 0.49
PFDN4-201ENST00000371419 TNFRSF25Q93038 417 aa18.13■□□□□ 0.49
PFDN4-201ENST00000371419 MYH7BA7E2Y1 1941 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 MEIS1O00470 390 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 GH1P01241 217 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 C6orf222P0C671 652 aaPredicted RBP18.12■□□□□ 0.49
PFDN4-201ENST00000371419 PTGS1P23219 599 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 CIITAP33076 1130 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 NKX3-2P78367 333 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 SEMA3FQ13275 785 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 LRRC41Q15345 812 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 PIK3AP1Q6ZUJ8 805 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 NIPA1Q7RTP0 329 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 OR6J1Q8NGC5 347 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 CYP2W1Q8TAV3 490 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 COPS5Q92905 334 aa18.12■□□□□ 0.49
PFDN4-201ENST00000371419 FAM86B1E9PN63 330 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 H3BQV1 296 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 DNM1LO00429 736 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 CAPN15O75808 1086 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 FAM86B2P0C5J1 330 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 UBA1P22314 1058 aaKnown RBP18.11■□□□□ 0.49
PFDN4-201ENST00000371419 SP2Q02086 613 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 INF2Q27J81 1249 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 IFFO2Q5TF58 517 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 LARP1BQ659C4 914 aaKnown RBP18.11■□□□□ 0.49
PFDN4-201ENST00000371419 KLHDC9Q8NEP7 349 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 FOXP1Q9H334 677 aaPredicted RBP18.11■□□□□ 0.49
PFDN4-201ENST00000371419 FOXD4L1Q9NU39 408 aa18.11■□□□□ 0.49
PFDN4-201ENST00000371419 MYADML2A6NDP7 307 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 KBTBD13C9JR72 458 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 CTAGE5O15320 804 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 EDIL3O43854 480 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 FARP2O94887 1054 aaPredicted RBP18.1■□□□□ 0.49
PFDN4-201ENST00000371419 PDCP20941 246 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 CST5P28325 142 aaPredicted RBP18.1■□□□□ 0.49
PFDN4-201ENST00000371419 ARHGAP1Q07960 439 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 LAMC2Q13753 1193 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 GNL2Q13823 731 aaKnown RBP18.1■□□□□ 0.49
PFDN4-201ENST00000371419 NEDD9Q14511 834 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 FSCN1Q16658 493 aaKnown RBP18.1■□□□□ 0.49
PFDN4-201ENST00000371419 EARS2Q5JPH6 523 aaKnown RBP18.1■□□□□ 0.49
PFDN4-201ENST00000371419 GNASQ5JWF2 1037 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 NEK8Q86SG6 692 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 PLA2G4DQ86XP0 818 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 DHX37Q8IY37 1157 aaKnown RBP18.1■□□□□ 0.49
PFDN4-201ENST00000371419 EMID1Q96A84 441 aaPredicted RBP18.1■□□□□ 0.49
PFDN4-201ENST00000371419 SENP7Q9BQF6 1050 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 KCNH7Q9NS40 1196 aa18.1■□□□□ 0.49
PFDN4-201ENST00000371419 IGLV3-22A0A075B6J6 115 aa18.09■□□□□ 0.49
PFDN4-201ENST00000371419 GGPS1O95749 300 aa18.09■□□□□ 0.49
PFDN4-201ENST00000371419 MNX1P50219 401 aaPredicted RBP18.09■□□□□ 0.49
PFDN4-201ENST00000371419 CPT1AP50416 773 aa18.09■□□□□ 0.49
PFDN4-201ENST00000371419 IRX5P78411 483 aaPredicted RBP18.09■□□□□ 0.49
PFDN4-201ENST00000371419 SETQ01105 290 aaPredicted RBP18.09■□□□□ 0.49
PFDN4-201ENST00000371419 BRDTQ58F21 947 aaPredicted RBP18.09■□□□□ 0.49
PFDN4-201ENST00000371419 CELF3Q5SZQ8 465 aaKnown RBP18.09■□□□□ 0.49
PFDN4-201ENST00000371419 MOXD1Q6UVY6 613 aa18.09■□□□□ 0.49
PFDN4-201ENST00000371419 PCSK9Q8NBP7 692 aaKnown RBP18.09■□□□□ 0.49
PFDN4-201ENST00000371419 GIMAP8Q8ND71 665 aaPredicted RBP18.09■□□□□ 0.49
PFDN4-201ENST00000371419 TSEN34Q9BSV6 310 aaKnown RBP18.09■□□□□ 0.49
PFDN4-201ENST00000371419 CYP3A7-CYP3A51PA0A087WV96 503 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 FAM205CA6NFA0 338 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 ZEB2O60315 1214 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 ATP9AO75110 1047 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 ARP10275 920 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 KCNA2P16389 499 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 CYP3A7P24462 503 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 BEX3Q00994 111 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 KCNA10Q16322 511 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 LETM2Q2VYF4 491 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 PRR16Q569H4 304 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 MYSM1Q5VVJ2 828 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 MLXIPQ9HAP2 919 aa18.08■□□□□ 0.49
PFDN4-201ENST00000371419 A6NJR5 290 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 U2AF2P26368 475 aaKnown RBP eCLIP18.07■□□□□ 0.48
PFDN4-201ENST00000371419 CCSAPQ6IQ19 270 aaPredicted RBP18.07■□□□□ 0.48
PFDN4-201ENST00000371419 METTL7BQ6UX53 244 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 CYFIP1Q7L576 1253 aa18.07■□□□□ 0.48
PFDN4-201ENST00000371419 NECAB2Q7Z6G3 386 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms