RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 HYOU1Q9Y4L1 999 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 HEXIM1O94992 359 aaKnown RBP12.03□□□□□ -0.48
LRIF1-201ENST00000369763 TUBBP07437 444 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 ADCY7P51828 1080 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 CENPPQ6IPU0 288 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 RETREG2Q8NC44 543 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 AK8Q96MA6 479 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 NOX5Q96PH1 765 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 STIM2Q9P246 746 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 BCCIPQ9P287 314 aaKnown RBP eCLIP12.03□□□□□ -0.48
LRIF1-201ENST00000369763 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 POTECB2RU33 542 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 PPFIA4O75335 1185 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 AKR1B1P15121 316 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 KCNMA1Q12791 1236 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 DDX42Q86XP3 938 aaKnown RBP eCLIP12.03□□□□□ -0.48
LRIF1-201ENST00000369763 AP1M1Q9BXS5 423 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 TSGA10Q9BZW7 698 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 BCS1LQ9Y276 419 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 ANO9A1A5B4 782 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 HSF2BPO75031 334 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 TM4SF1P30408 202 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 RFC4P35249 363 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 GUCY1A3Q02108 690 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 DCAF17Q5H9S7 520 aaPredicted RBP12.03□□□□□ -0.48
LRIF1-201ENST00000369763 KLHDC7AQ5VTJ3 777 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 UNC13DQ70J99 1090 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 TRMT1LQ7Z2T5 733 aaKnown RBP12.03□□□□□ -0.48
LRIF1-201ENST00000369763 MAATS1Q7Z4T9 603 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 ADAT2Q7Z6V5 191 aaKnown RBP12.03□□□□□ -0.48
LRIF1-201ENST00000369763 DHX37Q8IY37 1157 aaKnown RBP12.03□□□□□ -0.48
LRIF1-201ENST00000369763 MYOCDQ8IZQ8 938 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 OR2W6PQ8NHA6 318 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 AENQ8WTP8 325 aaKnown RBP12.03□□□□□ -0.48
LRIF1-201ENST00000369763 TSG101Q99816 390 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 IKZF4Q9H2S9 585 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 PANK4Q9NVE7 773 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 DOCK2Q92608 1830 aa12.03□□□□□ -0.48
LRIF1-201ENST00000369763 LRP5O75197 1615 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 A0A087X0T9 212 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 TMCO5BA8MYB1 307 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 TLR2O60603 784 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 FAM228BP0C875 321 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 PRPHP41219 470 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 AARSP49588 968 aaKnown RBP eCLIP12.02□□□□□ -0.48
LRIF1-201ENST00000369763 CACNB3P54284 484 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 GTF2IP78347 998 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 GPSM2P81274 684 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 COASYQ13057 564 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 TTC31Q49AM3 519 aaPredicted RBP12.02□□□□□ -0.48
LRIF1-201ENST00000369763 TTMPQ5BVD1 217 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 BAP1Q92560 729 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 ZIM3Q96PE6 472 aa12.02□□□□□ -0.48
LRIF1-201ENST00000369763 RTFDC1Q9BY42 306 aaPredicted RBP12.02□□□□□ -0.48
LRIF1-201ENST00000369763 DDX25Q9UHL0 483 aaKnown RBP12.02□□□□□ -0.48
LRIF1-201ENST00000369763 TARSL2A2RTX5 802 aaKnown RBP12.02□□□□□ -0.49
LRIF1-201ENST00000369763 SFI1A8K8P3 1242 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 LAD1O00515 517 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 KCNK3O14649 394 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 PDHBP11177 359 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 CYP4A11Q02928 519 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 SFMBT2Q5VUG0 894 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 CCDC84Q86UT8 332 aaPredicted RBP12.02□□□□□ -0.49
LRIF1-201ENST00000369763 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.49
LRIF1-201ENST00000369763 RAD54LQ92698 747 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 C8orf37Q96NL8 207 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 NYXQ9GZU5 481 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
LRIF1-201ENST00000369763 RTCBQ9Y3I0 505 aaKnown RBP12.02□□□□□ -0.49
LRIF1-201ENST00000369763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.02□□□□□ -0.49
LRIF1-201ENST00000369763 USP17L10C9JJH3 530 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 MYL1P05976 194 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 KLHL30Q0D2K2 578 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 FAM26FQ5R3K3 315 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 LRRC55Q6ZSA7 311 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 ZNF804AQ7Z570 1209 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 FNBP4Q8N3X1 1017 aaPredicted RBP12.02□□□□□ -0.49
LRIF1-201ENST00000369763 RPGRIP1Q96KN7 1286 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 TRIM31Q9BZY9 425 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 TSPYL1Q9H0U9 437 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 VIPAS39Q9H9C1 493 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.02□□□□□ -0.497e-7■■■■■ 40.4
LRIF1-201ENST00000369763 PCDHA12Q9UN75 941 aa12.02□□□□□ -0.49
LRIF1-201ENST00000369763 NNTQ13423 1086 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 SLC9C1Q4G0N8 1177 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 NAA35Q5VZE5 725 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 PDXDC1Q6P996 788 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 DAGLBQ8NCG7 672 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 PURBQ96QR8 312 aaKnown RBP12.01□□□□□ -0.49
LRIF1-201ENST00000369763 CD209Q9NNX6 404 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 POTEFA5A3E0 1075 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 NDUFAB1O14561 156 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 EDIL3O43854 480 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 TCP1P17987 556 aaKnown RBP12.01□□□□□ -0.49
LRIF1-201ENST00000369763 TCP10Q12799 353 aa12.01□□□□□ -0.49
LRIF1-201ENST00000369763 FBXW10Q5XX13 1052 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms