RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.83■□□□□ 0.29
PHTF1-202ENST00000369598 CYTH3O43739 400 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
PHTF1-202ENST00000369598 CALML3P27482 149 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 ELF1P32519 619 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 KRT31Q15323 416 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 PTPROQ16827 1216 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 LRCH2Q5VUJ6 765 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 CCNI2Q6ZMN8 369 aaPredicted RBP16.83■□□□□ 0.28
PHTF1-202ENST00000369598 GPKOWQ92917 476 aaPredicted RBP eCLIP16.83■□□□□ 0.28
PHTF1-202ENST00000369598 VAT1LQ9HCJ6 419 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 SH3GLB2Q9NR46 395 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 ZNRF3Q9ULT6 936 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
PHTF1-202ENST00000369598 USP17L5A8MUK1 530 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 MORC3Q14149 939 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 TTMPQ5BVD1 217 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 RRAGBQ5VZM2 374 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 APTXQ7Z2E3 356 aaKnown RBP16.83■□□□□ 0.28
PHTF1-202ENST00000369598 CNGA4Q8IV77 575 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 LRRC47Q8N1G4 583 aaKnown RBP16.83■□□□□ 0.28
PHTF1-202ENST00000369598 CPVLQ9H3G5 476 aa16.83■□□□□ 0.28
PHTF1-202ENST00000369598 TRIM49BA6NDI0 452 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 FAM196BA6NMK8 535 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 NDUFA10O95299 355 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 WDR93Q6P2C0 686 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 CLEC10AQ8IUN9 316 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 PLIN2Q99541 437 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 BCCIPQ9P287 314 aaKnown RBP eCLIP16.82■□□□□ 0.28
PHTF1-202ENST00000369598 PLIN4Q96Q06 1357 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 OPLAHO14841 1288 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 DLGAP5Q15398 846 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 CERKLQ49MI3 558 aaPredicted RBP16.82■□□□□ 0.28
PHTF1-202ENST00000369598 EARS2Q5JPH6 523 aaKnown RBP16.82■□□□□ 0.28
PHTF1-202ENST00000369598 CEP85LQ5SZL2 805 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 SH3BP5LQ7L8J4 393 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 HEATR3Q7Z4Q2 680 aa16.82■□□□□ 0.28
PHTF1-202ENST00000369598 E7EVH7 732 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 UPP2O95045 317 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 KLK7P49862 253 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 CLNS1AP54105 237 aaKnown RBP16.81■□□□□ 0.28
PHTF1-202ENST00000369598 BIRC2Q13490 618 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 NPY5RQ15761 445 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 SLC35G1Q2M3R5 365 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 RNPC3Q96LT9 517 aaKnown RBP16.81■□□□□ 0.28
PHTF1-202ENST00000369598 CCDC114Q96M63 670 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 SPZ1Q9BXG8 430 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 TTC26A0AVF1 554 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 ENTPD3O75355 529 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 MYBL1P10243 752 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 AARSP49588 968 aaKnown RBP eCLIP16.81■□□□□ 0.28
PHTF1-202ENST00000369598 CDR1P51861 262 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 SPRED3Q2MJR0 410 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 CYP26C1Q6V0L0 522 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 POTEDQ86YR6 584 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 UBA5Q9GZZ9 404 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 VEZTQ9HBM0 779 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 KLC4Q9NSK0 619 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 DACH1Q9UI36 760 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 MYH8P13535 1937 aa16.81■□□□□ 0.28
PHTF1-202ENST00000369598 NCK2O43639 380 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 NNTQ13423 1086 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 TRAPPC11Q7Z392 1133 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 TMTC1Q8IUR5 882 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 BLIDQ8IZY5 108 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 SEC63Q9UGP8 760 aaKnown RBP16.8■□□□□ 0.28
PHTF1-202ENST00000369598 SMARCA1P28370 1054 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 NAP1L1P55209 391 aaKnown RBP16.8■□□□□ 0.28
PHTF1-202ENST00000369598 SPATA1Q5VX52 437 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 PIK3AP1Q6ZUJ8 805 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 JDP2Q8WYK2 163 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 DNAJC18Q9H819 358 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 FRMPD2Q68DX3 1309 aaPredicted RBP16.8■□□□□ 0.28
PHTF1-202ENST00000369598 CCDC189A1A4V9 331 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 MEFVO15553 781 aaPredicted RBP16.8■□□□□ 0.28
PHTF1-202ENST00000369598 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 BRD2P25440 801 aaKnown RBP16.8■□□□□ 0.28
PHTF1-202ENST00000369598 NEDD9Q14511 834 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 NOC3LQ8WTT2 800 aaKnown RBP16.8■□□□□ 0.28
PHTF1-202ENST00000369598 TNFRSF25Q93038 417 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 GMLQ99445 158 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 PCDHA4Q9UN74 947 aa16.8■□□□□ 0.28
PHTF1-202ENST00000369598 TCP10L2B9ZVM9 353 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 TRADDQ15628 312 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 CLRN2A0PK11 232 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 PTPREP23469 700 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 ZNF174Q15697 407 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 ASPRV1Q53RT3 343 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 MIEF2Q96C03 454 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 GPCPD1Q9NPB8 672 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 AGPAT5Q9NUQ2 364 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 HAUS2Q9NVX0 235 aa16.79■□□□□ 0.28
PHTF1-202ENST00000369598 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms