RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 ADAMTS3O15072 1205 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 DYNC1LI2O43237 492 aaPredicted RBP11.29□□□□□ -0.6
NUP43-202ENST00000367402 ADCY6O43306 1168 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 FARP2O94887 1054 aaPredicted RBP11.29□□□□□ -0.6
NUP43-202ENST00000367402 C6orf222P0C671 652 aaPredicted RBP11.29□□□□□ -0.6
NUP43-202ENST00000367402 CLK2P49760 499 aaKnown RBP11.29□□□□□ -0.6
NUP43-202ENST00000367402 FOSBP53539 338 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
NUP43-202ENST00000367402 AP3B2Q13367 1082 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 TRIM29Q14134 588 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 GNPTABQ3T906 1256 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 DUSP28Q4G0W2 176 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 TMEM63BQ5T3F8 832 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
NUP43-202ENST00000367402 PCNX4Q63HM2 1172 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 MCTP2Q6DN12 878 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 GALNT17Q6IS24 598 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 XRRA1Q6P2D8 792 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 RNF180Q86T96 592 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 FAM184AQ8NB25 1140 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 RASGRP4Q8TDF6 673 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 ANO3Q9BYT9 981 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 AP5M1Q9H0R1 490 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 GJB4Q9NTQ9 266 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 PCDHA4Q9UN74 947 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 FRMPD4Q14CM0 1322 aa11.29□□□□□ -0.6
NUP43-202ENST00000367402 KBTBD13C9JR72 458 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 STAM2O75886 525 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 RGS20O76081 388 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 ARIH2O95376 493 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 PTGS1P23219 599 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 HMGN5P82970 282 aaKnown RBP11.28□□□□□ -0.6
NUP43-202ENST00000367402 LRRC41Q15345 812 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 LY6KQ17RY6 165 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 TLK2Q86UE8 772 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 BLIDQ8IZY5 108 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 FAM177A1Q8N128 213 aaPredicted RBP11.28□□□□□ -0.6
NUP43-202ENST00000367402 DIS3LQ8TF46 1054 aaKnown RBP11.28□□□□□ -0.6
NUP43-202ENST00000367402 PAWRQ96IZ0 340 aaKnown RBP11.28□□□□□ -0.6
NUP43-202ENST00000367402 PHF20Q9BVI0 1012 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
NUP43-202ENST00000367402 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
NUP43-202ENST00000367402 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.6
NUP43-202ENST00000367402 DNM1LO00429 736 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 NKRFO15226 690 aaKnown RBP eCLIP11.27□□□□□ -0.61
NUP43-202ENST00000367402 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 ZNF76P36508 570 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 GJA9P57773 515 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 ARHGAP4P98171 946 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 NECAB2Q7Z6G3 386 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 NLRX1Q86UT6 975 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 COPS5Q92905 334 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 C11orf49Q9H6J7 331 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 BRMS1Q9HCU9 246 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 DDX41Q9UJV9 622 aaKnown RBP11.27□□□□□ -0.61
NUP43-202ENST00000367402 Q9Y3F1 56 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 MYH6P13533 1939 aa11.27□□□□□ -0.61
NUP43-202ENST00000367402 MYADML2A6NDP7 307 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 SORBS3O60504 671 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 GH1P01241 217 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 TGFB3P10600 412 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 ITGB5P18084 799 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 SREBF1P36956 1147 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 RGS19P49795 217 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 BEX3Q00994 111 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 KCNA10Q16322 511 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 FSCN1Q16658 493 aaKnown RBP11.26□□□□□ -0.61
NUP43-202ENST00000367402 KRT40Q6A162 431 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 DHX37Q8IY37 1157 aaKnown RBP11.26□□□□□ -0.61
NUP43-202ENST00000367402 PCSK9Q8NBP7 692 aaKnown RBP11.26□□□□□ -0.61
NUP43-202ENST00000367402 DAGLBQ8NCG7 672 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 FERMT2Q96AC1 680 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 C8orf76Q96K31 380 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
NUP43-202ENST00000367402 SENP6Q9GZR1 1112 aaPredicted RBP11.26□□□□□ -0.61
NUP43-202ENST00000367402 UPF3AQ9H1J1 476 aaKnown RBP11.26□□□□□ -0.61
NUP43-202ENST00000367402 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.26□□□□□ -0.61
NUP43-202ENST00000367402 UBIAD1Q9Y5Z9 338 aa11.26□□□□□ -0.61
NUP43-202ENST00000367402 CCDC194A0A1B0GVG4 234 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 M0R2N6 131 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 FIBPO43427 364 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 ZEB2O60315 1214 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 KRT2P35908 639 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 ACLYP53396 1101 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 SP2Q02086 613 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 GUCY1B3Q02153 619 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 MTMR1Q13613 665 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 LAMC2Q13753 1193 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 SAFBQ15424 915 aaKnown RBP eCLIP11.25□□□□□ -0.61
NUP43-202ENST00000367402 NPY5RQ15761 445 aa11.25□□□□□ -0.61
NUP43-202ENST00000367402 CEP55Q53EZ4 464 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms