RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 NOP9Q86U38 636 aaKnown RBP9.99□□□□□ -0.81
YBX3-204ENST00000366290 CDH24Q86UP0 819 aa9.99□□□□□ -0.81
YBX3-204ENST00000366290 DEPDC7Q96QD5 511 aa9.99□□□□□ -0.81
YBX3-204ENST00000366290 DUSP23Q9BVJ7 150 aa9.99□□□□□ -0.81
YBX3-204ENST00000366290 STOML1Q9UBI4 398 aa9.99□□□□□ -0.81
YBX3-204ENST00000366290 ARFGEF1Q9Y6D6 1849 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 CHL1O00533 1208 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 LEFTY1O75610 366 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 CAMTA2O94983 1202 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 CHMP4BP1P59074 171 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 NCAPHQ15003 741 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 GNPTABQ3T906 1256 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 CLEC4GQ6UXB4 293 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 PPFIBP1Q86W92 1011 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 DNAJC5GQ8N7S2 189 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 GIMAP7Q8NHV1 300 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 GATA6Q92908 595 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 MRFAP1L1Q96HT8 127 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 CCDC113Q9H0I3 377 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 DLEC1Q9Y238 1755 aa9.98□□□□□ -0.81
YBX3-204ENST00000366290 FAM221BA6H8Z2 402 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 ETV3P41162 512 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 SLC7A5Q01650 507 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 BBS9Q3SYG4 887 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 TDRD10Q5VZ19 366 aaKnown RBP9.97□□□□□ -0.81
YBX3-204ENST00000366290 KIAA1211LQ6NV74 962 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 LRP10Q7Z4F1 713 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 KLHL6Q8WZ60 621 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 TBC1D32Q96NH3 1257 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 TSPYL4Q9UJ04 414 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 CARMIL3Q8ND23 1372 aa9.97□□□□□ -0.81
YBX3-204ENST00000366290 EOMESO95936 686 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 FAM87AP0C7U9 286 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 ZNF853P0CG23 659 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 DPEP1P16444 411 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 ADMP35318 185 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 MRM1Q6IN84 353 aaKnown RBP9.96□□□□□ -0.82
YBX3-204ENST00000366290 GIMAP6Q6P9H5 292 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 ZAR1Q86SH2 424 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 ZNF512BQ96KM6 892 aaPredicted RBP9.96□□□□□ -0.82
YBX3-204ENST00000366290 KREMEN1Q96MU8 473 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 NUP98P52948 1817 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 ANKRD31Q8N7Z5 1873 aa9.96□□□□□ -0.82
YBX3-204ENST00000366290 PCNTO95613 3336 aa9.95□□□□□ -0.82
YBX3-204ENST00000366290 ERVV-1B6SEH8 477 aa9.95□□□□□ -0.82
YBX3-204ENST00000366290 C9IYK1 514 aa9.95□□□□□ -0.82
YBX3-204ENST00000366290 PDPK1O15530 556 aa9.95□□□□□ -0.82
YBX3-204ENST00000366290 SERPINB2P05120 415 aa9.95□□□□□ -0.82
YBX3-204ENST00000366290 TBC1D9BQ66K14 1250 aa9.95□□□□□ -0.82
YBX3-204ENST00000366290 ZNF746Q6NUN9 644 aaPredicted RBP9.95□□□□□ -0.82
YBX3-204ENST00000366290 FAM86C1Q9NVL1 165 aa9.95□□□□□ -0.82
YBX3-204ENST00000366290 TPX2Q9ULW0 747 aaKnown RBP9.95□□□□□ -0.82
YBX3-204ENST00000366290 ZNF521Q96K83 1311 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 TP53P04637 393 aaPredicted RBP9.94□□□□□ -0.82
YBX3-204ENST00000366290 HOXB7P09629 217 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 PIP4K2AP48426 406 aaPredicted RBP9.94□□□□□ -0.82
YBX3-204ENST00000366290 RASGRF1Q13972 1273 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 NBPF12Q5TAG4 269 aaPredicted RBP9.94□□□□□ -0.82
YBX3-204ENST00000366290 SHISA5Q8N114 240 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 RNF141Q8WVD5 230 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 VWCEQ96DN2 955 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 MFSD14AQ96MC6 490 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 NMRK2Q9NPI5 230 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 PIM2Q9P1W9 311 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 ZNF652Q9Y2D9 606 aa9.94□□□□□ -0.82
YBX3-204ENST00000366290 FSTP19883 344 aa9.93□□□□□ -0.82
YBX3-204ENST00000366290 RNF4P78317 190 aa9.93□□□□□ -0.82
YBX3-204ENST00000366290 CALD1Q05682 793 aaKnown RBP9.93□□□□□ -0.82
YBX3-204ENST00000366290 RNF43Q68DV7 783 aa9.93□□□□□ -0.82
YBX3-204ENST00000366290 OGFOD3Q6PK18 319 aa9.93□□□□□ -0.82
YBX3-204ENST00000366290 CCDC144CPQ8IYA2 1237 aa9.93□□□□□ -0.82
YBX3-204ENST00000366290 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
YBX3-204ENST00000366290 ASPNQ9BXN1 380 aa9.93□□□□□ -0.82
YBX3-204ENST00000366290 MKRN2Q9H000 416 aaKnown RBP9.93□□□□□ -0.82
YBX3-204ENST00000366290 IFT57Q9NWB7 429 aa9.93□□□□□ -0.82
YBX3-204ENST00000366290 MAP3K15Q6ZN16 1313 aa9.92□□□□□ -0.82
YBX3-204ENST00000366290 KLRG2A4D1S0 409 aaPredicted RBP9.92□□□□□ -0.82
YBX3-204ENST00000366290 TOMM70O94826 608 aa9.92□□□□□ -0.82
YBX3-204ENST00000366290 CYP7A1P22680 504 aa9.92□□□□□ -0.82
YBX3-204ENST00000366290 AXDND1Q5T1B0 1012 aaPredicted RBP9.92□□□□□ -0.82
YBX3-204ENST00000366290 ARTNQ5T4W7 220 aa9.92□□□□□ -0.82
YBX3-204ENST00000366290 PRR5LQ6MZQ0 368 aa9.92□□□□□ -0.82
YBX3-204ENST00000366290 ARHGAP27Q6ZUM4 889 aa9.92□□□□□ -0.82
YBX3-204ENST00000366290 FBXL6Q8N531 539 aa9.92□□□□□ -0.82
YBX3-204ENST00000366290 PRDM5Q9NQX1 630 aaPredicted RBP9.92□□□□□ -0.82
YBX3-204ENST00000366290 IBTKQ9P2D0 1353 aaPredicted RBP9.91□□□□□ -0.82
YBX3-204ENST00000366290 COL11A2P13942 1736 aaPredicted RBP9.91□□□□□ -0.82
YBX3-204ENST00000366290 SCO2A0A1W2PP80 73 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 FAM170BA6NMN3 283 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 CHRNA5P30532 468 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 PRELPP51888 382 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 IFRD2Q12894 506 aaPredicted RBP9.91□□□□□ -0.82
YBX3-204ENST00000366290 HLFQ16534 295 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 DALRD3Q5D0E6 543 aaKnown RBP9.91□□□□□ -0.82
YBX3-204ENST00000366290 FAM214BQ7L5A3 538 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 EEPD1Q7L9B9 569 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 CNBD1Q8NA66 436 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 FBXL18Q96ME1 805 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 HAUS7Q99871 368 aa9.91□□□□□ -0.82
YBX3-204ENST00000366290 SBF1O95248 1867 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms