RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 MICU3Q86XE3 530 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 FAM178BQ8IXR5 827 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 ZNF654Q8IZM8 581 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 GJD3Q8N144 294 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 ANKS1AQ92625 1134 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 SLC9A7Q96T83 725 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 TEX13BQ9BXU2 312 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 FAM217BQ9NTX9 383 aaPredicted RBP12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 MICAL3Q7RTP6 2002 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 H3BQV1 296 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 TRAK2O60296 914 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 DDAH1O94760 285 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 CALM1P0DP23 149 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 CALM2P0DP24 149 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 CALM3P0DP25 149 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 CDC27P30260 824 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 CDK8P49336 464 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 NTRK3Q16288 839 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 RTN1Q16799 776 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 ARMCX2Q7L311 632 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 ZNF444Q8N0Y2 327 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 ZSCAN16Q9H4T2 348 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 LMBRD1Q9NUN5 540 aa12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-202ENST00000366216 TCHHQ07283 1943 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 DTNBO60941 627 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 ACTN1P12814 892 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 IFNAR1P17181 557 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 RASA1P20936 1047 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 TFAP4Q01664 338 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 CNTN2Q02246 1040 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 TNFAIP2Q03169 654 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 FSCN1Q16658 493 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 DEFB128Q7Z7B8 93 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 CCDC144CPQ8IYA2 1237 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 FANCBQ8NB91 859 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 GNEQ9Y223 722 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-202ENST00000366216 TECTAO75443 2155 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 RALGAPA2Q2PPJ7 1873 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 RXRAP19793 462 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 PSMC6P62333 389 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 LEXMQ3ZCV2 418 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 TLK2Q86UE8 772 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 HERC6Q8IVU3 1022 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 NEDD1Q8NHV4 660 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 MAP3K14Q99558 947 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 MYL10Q9BUA6 226 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 RBM28Q9NW13 759 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 LMCD1Q9NZU5 365 aa12.91□□□□□ -0.34
CSNK1E-202ENST00000366216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 KIF28PB7ZC32 967 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 RAD21O60216 631 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 ZEB2O60315 1214 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 TSPY3P0CV98 308 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 TSPY8P0CW00 308 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 NOVP48745 357 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 SSRP1Q08945 709 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 TROAPQ12815 778 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 RESTQ13127 1097 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 RCSD1Q6JBY9 416 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 ANKRD35Q8N283 1001 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 GDPD5Q8WTR4 605 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 PPP1R13LQ8WUF5 828 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 WASF1Q92558 559 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 C8orf76Q96K31 380 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 SLF1Q9BQI6 1058 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 AP5M1Q9H0R1 490 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 UBE2ZQ9H832 354 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 RAVER2Q9HCJ3 691 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 PDGFCQ9NRA1 345 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 IL17RBQ9NRM6 502 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 PLIN4Q96Q06 1357 aa12.9□□□□□ -0.34
CSNK1E-202ENST00000366216 MYH7BA7E2Y1 1941 aa12.9□□□□□ -0.35
CSNK1E-202ENST00000366216 SOWAHBA6NEL2 793 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 DCXO43602 365 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 KLHL40Q2TBA0 621 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 PTCRAQ6ISU1 281 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 TRIM22Q8IYM9 498 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 CPXCR1Q8N123 301 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 FBXO18Q8NFZ0 1043 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 KANSL2Q9H9L4 492 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 CACNA1HO95180 2353 aa12.89□□□□□ -0.35
CSNK1E-202ENST00000366216 ZNF536O15090 1300 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms