RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 KCNB2Q92953 911 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 ZFP91Q96JP5 570 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 NEK1Q96PY6 1258 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 BCAS3Q9H6U6 928 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SLC12A7Q9Y666 1083 aa15.79■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SCN5AQ14524 2016 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SPATA31C2B4DYI2 1134 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 STAM2O75886 525 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 GGPS1O95749 300 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 IQCF3P0C7M6 154 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PBX2P40425 430 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 RBL2Q08999 1139 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 GPNMBQ14956 572 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 RNF20Q5VTR2 975 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 OTOP2Q7RTS6 562 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 GTF2IRD1Q9UHL9 959 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 TANC1Q9C0D5 1861 aa15.78■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PFKMP08237 780 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 RFC2P35250 354 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PSEN2P49810 448 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 FUT2Q10981 343 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 GRIN2CQ14957 1233 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PTGISQ16647 500 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 PCNX4Q63HM2 1172 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 APOA5Q6Q788 366 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 DHX32Q7L7V1 743 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 DHX38Q92620 1227 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 TIFAQ96CG3 184 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 C16orf70Q9BSU1 422 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 ZNF576Q9H609 170 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 HDAC6Q9UBN7 1215 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 SEC63Q9UGP8 760 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 BRPF3Q9ULD4 1205 aa15.77■□□□□ 0.12
TNFRSF1A-202ENST00000366159 BFSP2Q13515 415 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 HIC1Q14526 733 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 MFSD10Q14728 455 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 XRRA1Q6P2D8 792 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 RAB11FIP4Q86YS3 637 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CAGE1Q8TC20 777 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 MYLIPQ8WY64 445 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SPATA33Q96N06 139 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 KATNAL1Q9BW62 490 aa15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 MTIF3Q9H2K0 278 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TRANK1O15050 2925 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 ZNF286BP0CG31 522 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 HOXC8P31273 242 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 KIAA0753Q2KHM9 967 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TRIM71Q2Q1W2 868 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SMARCC2Q8TAQ2 1214 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TCEANC2Q96MN5 208 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 PSTPIP2Q9H939 334 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 RTEL1Q9NZ71 1219 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 GBF1Q92538 1859 aa15.75■□□□□ 0.11
TNFRSF1A-202ENST00000366159 hCG_1642624A0A1W2PR95 340 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 FIBPO43427 364 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 KRT32Q14532 448 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 GNPTABQ3T906 1256 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TRAF7Q6Q0C0 670 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 METTL7BQ6UX53 244 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 DEFB128Q7Z7B8 93 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 MICU3Q86XE3 530 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CCDC82Q8N4S0 544 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 C7orf31Q8N865 590 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 RETREG2Q8NC44 543 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 AFAP1L1Q8TED9 768 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CUL5Q93034 780 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SENP7Q9BQF6 1050 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 ALG1Q9BT22 464 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 MLXIPQ9HAP2 919 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 YBX2Q9Y2T7 364 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TRIP12Q14669 1992 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CNTNAP5Q8WYK1 1306 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TET1Q8NFU7 2136 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 VCANP13611 3396 aa15.74■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SPTBN5Q9NRC6 3674 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SORBS3O60504 671 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CXCL10P02778 98 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 HSPA4P34932 840 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CHMP4BP1P59074 171 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 PTK7Q13308 1070 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 NEDD9Q14511 834 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 RAB30Q15771 203 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TYW1BQ6NUM6 668 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 WNT8BQ93098 351 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 GPR20Q99678 358 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 RBM28Q9NW13 759 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 NOD1Q9Y239 953 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 TELO2Q9Y4R8 837 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SLC4A7Q9Y6M7 1214 aa15.73■□□□□ 0.11
TNFRSF1A-202ENST00000366159 DOCK5Q9H7D0 1870 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 H3BRB1 525 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 LGALS2P05162 132 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 HMGB1P09429 215 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 CKBP12277 381 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 SELPP16109 830 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 ITGB5P18084 799 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 RCAN1P53805 252 aa15.72■□□□□ 0.11
TNFRSF1A-202ENST00000366159 ZNF200P98182 395 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms