RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 SND1Q7KZF4 910 aaKnown RBP eCLIP10.07□□□□□ -0.8
TOP1-201ENST00000361337 TADA2BQ86TJ2 420 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 TSEN2Q8NCE0 465 aaKnown RBP10.07□□□□□ -0.8
TOP1-201ENST00000361337 CDK5RAP3Q96JB5 506 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 MLXIPQ9HAP2 919 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 RGS17Q9UGC6 210 aaPredicted RBP10.07□□□□□ -0.8
TOP1-201ENST00000361337 SERPINB13Q9UIV8 391 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 DAGLAQ9Y4D2 1042 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 CAPN6Q9Y6Q1 641 aa10.07□□□□□ -0.8
TOP1-201ENST00000361337 NUP98P52948 1817 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 GOLGA6CA6NDK9 693 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 GTPBP6O43824 516 aaPredicted RBP10.06□□□□□ -0.8
TOP1-201ENST00000361337 GOLGA6DP0CG33 693 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 CDK8P49336 464 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 TROAPQ12815 778 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 ARL8AQ96BM9 186 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 CCDC43Q96MW1 224 aaKnown RBP10.06□□□□□ -0.8
TOP1-201ENST00000361337 NHEJ1Q9H9Q4 299 aaPredicted RBP10.06□□□□□ -0.8
TOP1-201ENST00000361337 GOLGA6AQ9NYA3 693 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 GRIN2DO15399 1336 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 FAM205AQ6ZU69 1335 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 GOLGA6BA6NDN3 693 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 GUCY2CP25092 1073 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 UBXN2AP68543 259 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 SH2D3CQ8N5H7 860 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 HPS3Q969F9 1004 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 RNF181Q9P0P0 153 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 LRWD1Q9UFC0 647 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 BAIAP2L1Q9UHR4 511 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 CAPN11Q9UMQ6 739 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 KLRF2D3W0D1 207 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 PRPF3O43395 683 aaKnown RBP10.06□□□□□ -0.8
TOP1-201ENST00000361337 SHOX2O60902 331 aaPredicted RBP10.06□□□□□ -0.8
TOP1-201ENST00000361337 TUBB4BP68371 445 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 MAP9Q49MG5 647 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 CIAPIN1Q6FI81 312 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 MAATS1Q7Z4T9 603 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 PNMA8AQ86V59 439 aaPredicted RBP10.06□□□□□ -0.8
TOP1-201ENST00000361337 CREG2Q8IUH2 290 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 ADSSL1Q8N142 457 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 FAM76AQ8TAV0 307 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 CRAMP1Q96RY5 1269 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 IRAK4Q9NWZ3 460 aa10.06□□□□□ -0.8
TOP1-201ENST00000361337 ARPP21Q9UBL0 812 aaPredicted RBP10.06□□□□□ -0.8
TOP1-201ENST00000361337 TIAM2Q8IVF5 1701 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 GOLGA6L10A6NI86 522 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 EPHB6O15197 1021 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 SKAP2O75563 359 aaPredicted RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 TM4SF1P30408 202 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 AENQ8WTP8 325 aaKnown RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 TTYH3Q9C0H2 523 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 ATP8A2Q9NTI2 1148 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 A0A1B0GUA9 196 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 NCK2O43639 380 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 GH2P01242 217 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 TRIM21P19474 475 aaKnown RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 SSR1P43307 286 aaKnown RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 TRIM14Q14142 442 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 KCTD16Q68DU8 428 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 NFRKBQ6P4R8 1299 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 MMS22LQ6ZRQ5 1243 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 SUPT20HQ8NEM7 779 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 COA7Q96BR5 231 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 BIN2Q9UBW5 565 aaPredicted RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 ODF2LQ9ULJ1 636 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 FAM169AQ9Y6X4 670 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 SPAG1Q07617 926 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 TTMPQ5BVD1 217 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 PODNQ7Z5L7 613 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 EFCAB13Q8IY85 973 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 ANKRD13CQ8N6S4 541 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 PRMT6Q96LA8 375 aaPredicted RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
TOP1-201ENST00000361337 TMEM60Q9H2L4 133 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 SPON1Q9HCB6 807 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 ZBTB21Q9ULJ3 1066 aa10.05□□□□□ -0.8
TOP1-201ENST00000361337 TARSL2A2RTX5 802 aaKnown RBP10.04□□□□□ -0.8
TOP1-201ENST00000361337 ZSCAN5CA6NGD5 496 aaPredicted RBP10.04□□□□□ -0.8
TOP1-201ENST00000361337 KLRC4O43908 158 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 MOCS3O95396 460 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 TUBBP07437 444 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 SCP2P22307 547 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 STAT6P42226 847 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 GNGT1P63211 74 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 SEPT2Q15019 361 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 AP1ARQ63HQ0 302 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 STAG2Q8N3U4 1231 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 C4orf32Q8N8J7 132 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 SALL4Q9UJQ4 1053 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 PDS5AQ29RF7 1337 aaKnown RBP10.04□□□□□ -0.8
TOP1-201ENST00000361337 CNTNAP5Q8WYK1 1306 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 CFBP00751 764 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 ICA1Q05084 483 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 PDCLQ13371 301 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms