RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 APOBEC3FQ8IUX4 373 aaKnown RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 TRIM58Q8NG06 486 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 NUP58Q9BVL2 599 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 DNAJC8O75937 253 aaPredicted RBP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 DYNC1I2Q13409 638 aaKnown RBP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 CUL4BQ13620 913 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 ANKRD35Q8N283 1001 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 ENOX1Q8TC92 643 aaKnown RBP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 UPF1Q92900 1129 aaKnown RBP eCLIP10.87□□□□□ -0.675e-6■□□□□ 10.5
SIN3A-201ENST00000360439 MTA3Q9BTC8 594 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 SLC5A4Q9NY91 659 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 TSPY1Q01534 308 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 KARSQ15046 597 aaKnown RBP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 ERMNQ8TAM6 284 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 FBF1Q8TES7 1133 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 ZCWPW1Q9H0M4 648 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 DISP2A7MBM2 1401 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 OPA1O60313 960 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 CSF1RP07333 972 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 PSMD7P51665 324 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 CCZ1BP86790 482 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 CCZ1P86791 482 aaPredicted RBP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 HLTFQ14527 1009 aaKnown RBP eCLIP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 ARHGEF6Q15052 776 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 SLC44A4Q53GD3 710 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 PRAMEF18Q5VWM3 479 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 FAM81AQ8TBF8 368 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 OSBP2Q969R2 916 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 PANX2Q96RD6 677 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 CENPOQ9BU64 300 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 RGPD1P0DJD0 1748 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 LUC7L3O95232 432 aaKnown RBP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 SPATA1Q5VX52 437 aa10.87□□□□□ -0.67
SIN3A-201ENST00000360439 ZSCAN10Q96SZ4 725 aaPredicted RBP10.87□□□□□ -0.67
SIN3A-201ENST00000360439 GNAT1P11488 350 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 GNGT1P63211 74 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 COG7P83436 770 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 ANGEL2Q5VTE6 544 aaKnown RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 CC2D1AQ6P1N0 951 aaPredicted RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 FOXP4Q8IVH2 680 aaPredicted RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 LZTFL1Q9NQ48 299 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 PAPOLBQ9NRJ5 636 aaKnown RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 ZHX2Q9Y6X8 837 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 TNKSO95271 1327 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 OSBPP22059 807 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 PAPOLAP51003 745 aaKnown RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 PAK1Q13153 545 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 TAF4BQ92750 862 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 NR1H4Q96RI1 486 aaPredicted RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 LRRC37A3O60309 1634 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 MTIF2P46199 727 aaKnown RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 CCDC15Q0P6D6 951 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 MB21D2Q8IYB1 491 aaPredicted RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 FBXL16Q8N461 479 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 GGA3Q9NZ52 723 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 RPS6KL1Q9Y6S9 549 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 PNPLA7Q6ZV29 1317 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 NOP56O00567 594 aaKnown RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 SLC26A4O43511 780 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 TACC1O75410 805 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 LIFRP42702 1097 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 UBXN1Q04323 297 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 RSBN1LQ6PCB5 846 aaPredicted RBP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 DPP9Q86TI2 863 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 SPATA24Q86W54 205 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 ATP6V0A1Q93050 837 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 HAUS1Q96CS2 278 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.86□□□□□ -0.67
SIN3A-201ENST00000360439 KANSL2Q9H9L4 492 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 CTNND2Q9UQB3 1225 aa10.86□□□□□ -0.67
SIN3A-201ENST00000360439 USP14P54578 494 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 LETM2Q2VYF4 491 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 APOA5Q6Q788 366 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 FANCLQ9NW38 375 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 HDAC6Q9UBN7 1215 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 NUB1Q9Y5A7 615 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 TTC30AQ86WT1 665 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 CMTR1Q8N1G2 835 aaKnown RBP10.85□□□□□ -0.67
SIN3A-201ENST00000360439 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 PALMDQ9NP74 551 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 SERTAD1Q9UHV2 236 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 GH2P01242 217 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 CCNA1P78396 465 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 MPP3Q13368 585 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 CCDC40Q4G0X9 1142 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 ATG9AQ7Z3C6 839 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 PHKBQ93100 1093 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 GSDMAQ96QA5 445 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 SPZ1Q9BXG8 430 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 FTOQ9C0B1 505 aaKnown RBP eCLIP10.85□□□□□ -0.67
SIN3A-201ENST00000360439 DTNBO60941 627 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms