RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 USP38Q8NB14 1042 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 CCT6BQ92526 530 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 SYN2Q92777 582 aaPredicted RBP13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 TATDN2Q93075 761 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 CCDC114Q96M63 670 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 CASZ1Q86V15 1759 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 SCTRP47872 440 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 CDR1P51861 262 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 AGBL2Q5U5Z8 902 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 DAGLBQ8NCG7 672 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 SEC16BQ96JE7 1060 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 KRT12Q99456 494 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 FAM207AQ9NSI2 230 aaPredicted RBP13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 CCDC88AQ3V6T2 1871 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 BUB1O43683 1085 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 UBA7P41226 1012 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 EP400NLQ6ZTU2 488 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 RRAGAQ7L523 313 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 ANKRD13CQ8N6S4 541 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 AK8Q96MA6 479 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 KDM4CQ9H3R0 1056 aa13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 PPANQ9NQ55 473 aaKnown RBP13.35□□□□□ -0.27
SMARCAL1-201ENST00000357276 GCOM1H8Y6P7 765 aaPredicted RBP13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 SNAP23O00161 211 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 ORC4O43929 436 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 PALMO75781 387 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 MYZAPP0CAP1 466 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 PLCG1P19174 1290 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 CUL1Q13616 776 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 TEX11Q8IYF3 940 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 TBC1D22AQ8WUA7 517 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 HAUS2Q9NVX0 235 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 THSD7AQ9UPZ6 1657 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 TLR2O60603 784 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 SCFD2Q8WU76 684 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 MYH4Q9Y623 1939 aa13.34□□□□□ -0.27
SMARCAL1-201ENST00000357276 SLC8A1P32418 973 aa13.33□□□□□ -0.27
SMARCAL1-201ENST00000357276 KCNMA1Q12791 1236 aa13.33□□□□□ -0.27
SMARCAL1-201ENST00000357276 PCDHA6Q9UN73 950 aa13.33□□□□□ -0.27
SMARCAL1-201ENST00000357276 PCDHA8Q9Y5H6 950 aa13.33□□□□□ -0.27
SMARCAL1-201ENST00000357276 COL1A1P02452 1464 aaPredicted RBP13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 MYH7BA7E2Y1 1941 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 MAGEB6P1A0A0J9YX57 407 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 BTNL10A8MVZ5 291 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 PPIP5K2O43314 1243 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 ERCC3P19447 782 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 CYP7A1P22680 504 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 BCAMP50895 628 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 SATB1Q01826 763 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 CNNM4Q6P4Q7 775 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 LRRC55Q6ZSA7 311 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 RAPGEF5Q92565 580 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 BCL9O00512 1426 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 SCN7AQ01118 1682 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 CYP2D7A0A087X1C5 515 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 PPP2R2AP63151 447 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 TMED8Q6PL24 325 aaPredicted RBP13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 MAATS1Q7Z4T9 603 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 MAB21L3Q8N8X9 362 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 LAMB2P55268 1798 aa13.33□□□□□ -0.28
SMARCAL1-201ENST00000357276 NOL4O94818 638 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 DRD4P21917 467 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 HPDP32754 393 aaPredicted RBP13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 TNNC1P63316 161 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 RUFY4Q6ZNE9 571 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 SEC14L1Q92503 715 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 CCDC47Q96A33 483 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 ZNF804BA4D1E1 1349 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 GOLGA6L10A6NI86 522 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 F8W031 263 aaPredicted RBP13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 KLRC1P26715 233 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 ATP2B2Q01814 1243 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 CCDC178Q5BJE1 867 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 RCSD1Q6JBY9 416 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 CABP7Q86V35 215 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 DNAJC10Q8IXB1 793 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 CENPTQ96BT3 561 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 LRRC45Q96CN5 670 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 PLIN2Q99541 437 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 NUCKS1Q9H1E3 243 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 LRP2BPQ9P2M1 347 aa13.32□□□□□ -0.28
SMARCAL1-201ENST00000357276 SERPING1P05155 500 aa13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 TMOD1P28289 359 aa13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 TMC4Q7Z404 712 aa13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 CACNA2D3Q8IZS8 1091 aa13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 NEUROG2Q9H2A3 272 aa13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 FTCDO95954 541 aa13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 EZRP15311 586 aaKnown RBP13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 SLC8A3P57103 927 aa13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 ASIC1P78348 528 aa13.31□□□□□ -0.28
SMARCAL1-201ENST00000357276 ELF3P78545 371 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms