RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 SMARCE1Q969G3 411 aa15.33■□□□□ 0.04
HOXA1-202ENST00000355633 DNAJC25Q9H1X3 360 aa15.33■□□□□ 0.04
HOXA1-202ENST00000355633 UBIAD1Q9Y5Z9 338 aa15.33■□□□□ 0.04
HOXA1-202ENST00000355633 PASKQ96RG2 1323 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 ARP10275 920 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 XRCC6P12956 609 aaKnown RBP eCLIP15.32■□□□□ 0.04
HOXA1-202ENST00000355633 ERCC3P19447 782 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 CCND2P30279 289 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 NLRP12P59046 1061 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 Q3C1V9 767 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 LRCH2Q5VUJ6 765 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 NCAPH2Q6IBW4 605 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 XRRA1Q6P2D8 792 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 FAM200AQ8TCP9 573 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 STAMQ92783 540 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 SLC5A5Q92911 643 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 NUDT12Q9BQG2 462 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 ZNF577Q9BSK1 485 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 MAGEF1Q9HAY2 307 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 JADE2Q9NQC1 790 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
HOXA1-202ENST00000355633 LCTP09848 1927 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 SMC2O95347 1197 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 CAVIN2O95810 425 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 NR3C2P08235 984 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 ZNF157P51786 506 aaPredicted RBP15.31■□□□□ 0.04
HOXA1-202ENST00000355633 NT5DC1Q5TFE4 455 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 PNMA5Q96PV4 448 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 WDR11Q9BZH6 1224 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 STK17AQ9UEE5 414 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 VAV3Q9UKW4 847 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 STK24Q9Y6E0 443 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 SLC26A4O43511 780 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 PSMD10O75832 226 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 CCT6AP40227 531 aaKnown RBP15.31■□□□□ 0.04
HOXA1-202ENST00000355633 SARSP49591 514 aaKnown RBP15.31■□□□□ 0.04
HOXA1-202ENST00000355633 ERVK-9P63128 1117 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 ERVK-24P63145 666 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 DPYDQ12882 1025 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 MTMR1Q13613 665 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 HAUS3Q68CZ6 603 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 C11orf57Q6ZUT1 292 aaPredicted RBP15.31■□□□□ 0.04
HOXA1-202ENST00000355633 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 SPATA20Q8TB22 786 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 LRRC15Q8TF66 581 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 MTRQ99707 1265 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 KCNH7Q9NS40 1196 aa15.31■□□□□ 0.04
HOXA1-202ENST00000355633 IPO5O00410 1097 aaKnown RBP15.3■□□□□ 0.04
HOXA1-202ENST00000355633 KIF3CO14782 793 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 GTPBP6O43824 516 aaPredicted RBP15.3■□□□□ 0.04
HOXA1-202ENST00000355633 GAS7O60861 476 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 CASP1P29466 404 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 ZNF165P49910 485 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 DPCR1Q3MIW9 517 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 RGMBQ6NW40 437 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 VSIG10LQ86VR7 867 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 FAM43AQ8N2R8 423 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 SMC1BQ8NDV3 1235 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 DNERQ8NFT8 737 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 TEKT3Q9BXF9 490 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 NT5C3AQ9H0P0 336 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 KBTBD4Q9NVX7 518 aa15.3■□□□□ 0.04
HOXA1-202ENST00000355633 TESPA1A2RU30 521 aaPredicted RBP15.29■□□□□ 0.04
HOXA1-202ENST00000355633 PPP2R5CQ13362 524 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 TMEM119Q4V9L6 283 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 HYIQ5T013 277 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.29■□□□□ 0.04
HOXA1-202ENST00000355633 OTOP1Q7RTM1 612 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 TRIML1Q8N9V2 468 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 RIT2Q99578 217 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 BLZF1Q9H2G9 400 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 MROH8Q9H579 483 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 MAN1B1Q9UKM7 699 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 POTEB2H3BUK9 544 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 GCLCP48506 637 aaPredicted RBP15.29■□□□□ 0.04
HOXA1-202ENST00000355633 ECM1Q16610 540 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 SHCBP1Q8NEM2 672 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 GPRC5AQ8NFJ5 357 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 GSDMAQ96QA5 445 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 IWS1Q96ST2 819 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 PARK7Q99497 189 aaKnown RBP15.29■□□□□ 0.04
HOXA1-202ENST00000355633 PTPN18Q99952 460 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 NAT10Q9H0A0 1025 aaKnown RBP15.29■□□□□ 0.04
HOXA1-202ENST00000355633 CBX8Q9HC52 389 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 AGO4Q9HCK5 861 aaKnown RBP15.29■□□□□ 0.04
HOXA1-202ENST00000355633 BLOC1S4Q9NUP1 217 aa15.29■□□□□ 0.04
HOXA1-202ENST00000355633 STAM2O75886 525 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 MYL1P05976 194 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 CCNA1P78396 465 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 CNTN2Q02246 1040 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 CUL4BQ13620 913 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 UVSSAQ2YD98 709 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 NLRX1Q86UT6 975 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 ANKRD13CQ8N6S4 541 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 LARP4BQ92615 738 aaKnown RBP15.28■□□□□ 0.04
HOXA1-202ENST00000355633 R3HDMLQ9H3Y0 253 aa15.28■□□□□ 0.04
HOXA1-202ENST00000355633 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms