RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 STK4Q13043 487 aa20.66■□□□□ 0.9
TRIM41-202ENST00000351937 CEP55Q53EZ4 464 aa20.66■□□□□ 0.9
TRIM41-202ENST00000351937 NCAPH2Q6IBW4 605 aa20.66■□□□□ 0.9
TRIM41-202ENST00000351937 DDX12PQ92771 950 aa20.66■□□□□ 0.9
TRIM41-202ENST00000351937 LRRC10BA6NIK2 292 aa20.66■□□□□ 0.9
TRIM41-202ENST00000351937 ALAS1P13196 640 aa20.66■□□□□ 0.9
TRIM41-202ENST00000351937 YBX3P16989 372 aaKnown RBP eCLIP20.66■□□□□ 0.9
TRIM41-202ENST00000351937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.66■□□□□ 0.91e-6■■■■□ 20.3
TRIM41-202ENST00000351937 BMP2KQ9NSY1 1161 aaPredicted RBP20.66■□□□□ 0.9
TRIM41-202ENST00000351937 POTEB3A0JP26 581 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 POTECB2RU33 542 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 VWA5AO00534 786 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 NFIBO00712 420 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 MED24O75448 989 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 SKILP12757 684 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 SFPQP23246 707 aaKnown RBP eCLIP20.65■□□□□ 0.9
TRIM41-202ENST00000351937 ARMCX5Q6P1M9 558 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 POTEBQ6S5H4 581 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 DYMQ7RTS9 669 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 LIMA1Q9UHB6 759 aaKnown RBP20.65■□□□□ 0.9
TRIM41-202ENST00000351937 COBLO75128 1261 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 SETQ01105 290 aaPredicted RBP20.65■□□□□ 0.9
TRIM41-202ENST00000351937 PSMD2Q13200 908 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 FILIP1LQ4L180 1135 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 CATSPER3Q86XQ3 398 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 KCTD17Q8N5Z5 321 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 ANKRD20A12PQ8NF67 263 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 DCPSQ96C86 337 aaKnown RBP20.65■□□□□ 0.9
TRIM41-202ENST00000351937 ARID3AQ99856 593 aa20.65■□□□□ 0.9
TRIM41-202ENST00000351937 ADD3Q9UEY8 706 aaKnown RBP20.65■□□□□ 0.9
TRIM41-202ENST00000351937 BICDL2A1A5D9 508 aa20.64■□□□□ 0.9
TRIM41-202ENST00000351937 MEIS1O00470 390 aa20.64■□□□□ 0.9
TRIM41-202ENST00000351937 USP2O75604 605 aaPredicted RBP20.64■□□□□ 0.9
TRIM41-202ENST00000351937 PLA2G4BP0C869 781 aa20.64■□□□□ 0.9
TRIM41-202ENST00000351937 HMGCS2P54868 508 aa20.64■□□□□ 0.9
TRIM41-202ENST00000351937 CCZ1BP86790 482 aa20.64■□□□□ 0.9
TRIM41-202ENST00000351937 CCZ1P86791 482 aaPredicted RBP20.64■□□□□ 0.9
TRIM41-202ENST00000351937 C9orf131Q5VYM1 1079 aa20.64■□□□□ 0.9
TRIM41-202ENST00000351937 SPECC1LQ69YQ0 1117 aa20.64■□□□□ 0.9
TRIM41-202ENST00000351937 SLC5A5Q92911 643 aa20.64■□□□□ 0.9
TRIM41-202ENST00000351937 RPTORQ8N122 1335 aa20.64■□□□□ 0.89
TRIM41-202ENST00000351937 E9PMD0 336 aa20.64■□□□□ 0.89
TRIM41-202ENST00000351937 FCER1AP12319 257 aa20.64■□□□□ 0.89
TRIM41-202ENST00000351937 SPATA31C1P0DKV0 1188 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 CCNE1P24864 410 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 UBXN2AP68543 259 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 TCP11X2Q5H9J9 407 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 NOC3LQ8WTT2 800 aaKnown RBP20.63■□□□□ 0.89
TRIM41-202ENST00000351937 DNAJC19Q96DA6 116 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 POLR3CQ9BUI4 534 aaPredicted RBP20.63■□□□□ 0.89
TRIM41-202ENST00000351937 THAP9Q9H5L6 903 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 AFG3L2Q9Y4W6 797 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 PSMD10O75832 226 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 PMS1P54277 932 aaKnown RBP20.63■□□□□ 0.89
TRIM41-202ENST00000351937 EHHADHQ08426 723 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 LRCH2Q5VUJ6 765 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 TTI2Q6NXR4 508 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 OTOP1Q7RTM1 612 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 SULF1Q8IWU6 871 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 KIAA0895Q8NCT3 520 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 P2RX5Q93086 422 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 ATG4CQ96DT6 458 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 TMOD4Q9NZQ9 345 aa20.63■□□□□ 0.89
TRIM41-202ENST00000351937 TRIM49BA6NDI0 452 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 NRDCO43847 1150 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 IDEP14735 1019 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 OAZ1P54368 228 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 TBX2Q13207 712 aaPredicted RBP20.62■□□□□ 0.89
TRIM41-202ENST00000351937 PPP2R5CQ13362 524 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 MUM1L1Q5H9M0 696 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 KRT26Q7Z3Y9 468 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 COL20A1Q9P218 1284 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 ADAMTS5Q9UNA0 930 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 DNM3Q9UQ16 869 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 PHIPQ8WWQ0 1821 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 KCNJ18B7U540 433 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 KCNJ12Q14500 433 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 KRT31Q15323 416 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 TRIM47Q96LD4 638 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 MXRA8Q9BRK3 442 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 SLC39A2Q9NP94 309 aa20.62■□□□□ 0.89
TRIM41-202ENST00000351937 POTEFA5A3E0 1075 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 SSBP05455 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRIM41-202ENST00000351937 POTEIP0CG38 1075 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 DSG3P32926 999 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 MAP3K9P80192 1104 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 COG2Q14746 738 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 POTEGQ6S5H5 508 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 POTEEQ6S8J3 1075 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 RBM46Q8TBY0 533 aaKnown RBP20.61■□□□□ 0.89
TRIM41-202ENST00000351937 SYTL5Q8TDW5 730 aaPredicted RBP20.61■□□□□ 0.89
TRIM41-202ENST00000351937 TRERF1Q96PN7 1200 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 HOMER2Q9NSB8 354 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 BCRP11274 1271 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 EEF1GP26641 437 aaKnown RBP20.61■□□□□ 0.89
TRIM41-202ENST00000351937 SLC12A3P55017 1021 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 NIPA1Q7RTP0 329 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 EIF2AK1Q9BQI3 630 aaKnown RBP20.61■□□□□ 0.89
TRIM41-202ENST00000351937 ZNF577Q9BSK1 485 aa20.61■□□□□ 0.89
TRIM41-202ENST00000351937 WDR11Q9BZH6 1224 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms