RNA–Protein interactions for RNA: ENST00000344911.8

NTN4-202, Transcript of netrin 4, humanhuman

TSL 5 BASIC

Gene NTN4, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTN4-202ENST00000344911 ZIM3Q96PE6 472 aa11.15□□□□□ -0.62
NTN4-202ENST00000344911 OXCT2Q9BYC2 517 aaPredicted RBP11.15□□□□□ -0.62
NTN4-202ENST00000344911 PIH1D3Q9NQM4 214 aaKnown RBP11.15□□□□□ -0.62
NTN4-202ENST00000344911 WWC3Q9ULE0 1092 aa11.15□□□□□ -0.62
NTN4-202ENST00000344911 STK38LQ9Y2H1 464 aa11.15□□□□□ -0.62
NTN4-202ENST00000344911 N6AMT1Q9Y5N5 214 aa11.15□□□□□ -0.62
NTN4-202ENST00000344911 ATP2A2P16615 1042 aaKnown RBP11.14□□□□□ -0.63
NTN4-202ENST00000344911 SP100P23497 879 aaPredicted RBP11.14□□□□□ -0.63
NTN4-202ENST00000344911 BCAMP50895 628 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 KRT27Q7Z3Y8 459 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 TEX9Q8N6V9 391 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.14□□□□□ -0.63
NTN4-202ENST00000344911 RMDN2Q96LZ7 410 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 USP28Q96RU2 1077 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 UBA5Q9GZZ9 404 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 COL24A1Q17RW2 1714 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 TRIM43BA6NCK2 446 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 GMNCA6NCL1 334 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 RPS6KB1P23443 525 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 NDUFA8P51970 172 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 NLRP12P59046 1061 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 MRPS35P82673 323 aaKnown RBP11.14□□□□□ -0.63
NTN4-202ENST00000344911 RESTQ13127 1097 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 EZH2Q15910 746 aaKnown RBP11.14□□□□□ -0.63
NTN4-202ENST00000344911 MIGA2Q7L4E1 593 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 TMCO5AQ8N6Q1 288 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 AENQ8WTP8 325 aaKnown RBP11.14□□□□□ -0.63
NTN4-202ENST00000344911 NR1H4Q96RI1 486 aaPredicted RBP11.14□□□□□ -0.63
NTN4-202ENST00000344911 IWS1Q96ST2 819 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 ATP8A1Q9Y2Q0 1164 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 RFX7Q2KHR2 1363 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 FOXP2O15409 715 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 RNF113AO15541 343 aaKnown RBP11.14□□□□□ -0.63
NTN4-202ENST00000344911 IGBP1P78318 339 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 SLC9C2Q5TAH2 1124 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 PROM2Q8N271 834 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 HDAC7Q8WUI4 952 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.14□□□□□ -0.63
NTN4-202ENST00000344911 SPO11Q9Y5K1 396 aa11.14□□□□□ -0.63
NTN4-202ENST00000344911 RTL9Q8NET4 1388 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 PPIP5K2O43314 1243 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 ZPR1O75312 459 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 KCNJ2P63252 427 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 MYL5Q02045 173 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 C2orf54Q08AI8 447 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 SLC4A8Q2Y0W8 1093 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 LACTB2Q53H82 288 aaPredicted RBP11.13□□□□□ -0.63
NTN4-202ENST00000344911 SPECC1LQ69YQ0 1117 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 CPLX4Q7Z7G2 160 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 CCT6BQ92526 530 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 DUSP9Q99956 384 aaKnown RBP11.13□□□□□ -0.63
NTN4-202ENST00000344911 CEP131Q9UPN4 1083 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 ARAP2Q8WZ64 1704 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 MROH5Q6ZUA9 1318 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 SMIM22K7EJ46 135 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 CCND1P24385 295 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 GSTT1P30711 240 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.63
NTN4-202ENST00000344911 HDAC4P56524 1084 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 RIPK1Q13546 671 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 KANK3Q6NY19 840 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 NME8Q8N427 588 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 SRPK1Q96SB4 655 aaKnown RBP11.13□□□□□ -0.63
NTN4-202ENST00000344911 ZNF180Q9UJW8 692 aa11.13□□□□□ -0.63
NTN4-202ENST00000344911 UBR3Q6ZT12 1888 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 EPB41P11171 864 aaKnown RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 RXRAP19793 462 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 KLRK1P26718 216 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 TMOD1P28289 359 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 HOXD12P35452 270 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 OXCT1P55809 520 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 CHRNDQ07001 517 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 MKRN4PQ13434 485 aaPredicted RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 EXOC3L1Q86VI1 746 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 FMR1NBQ8N0W7 255 aaPredicted RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 GBP7Q8N8V2 638 aaPredicted RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 MIGA1Q8NAN2 632 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 SMC1BQ8NDV3 1235 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 MRPS27Q92552 414 aaKnown RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 PCDH18Q9HCL0 1135 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 DMAP1Q9NPF5 467 aaPredicted RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 TMCO1Q9UM00 188 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 GUCA1BQ9UMX6 200 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 A0A1B0GUL6 1792 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 FLOT1O75955 427 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 ZFXP17010 805 aaPredicted RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 MLH1P40692 756 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 ALDH5A1P51649 535 aaPredicted RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 AMPD2Q01433 879 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 DMPKQ09013 629 aa11.12□□□□□ -0.63
NTN4-202ENST00000344911 BYSLQ13895 437 aaKnown RBP11.12□□□□□ -0.63
NTN4-202ENST00000344911 RASGRF1Q13972 1273 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms