RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SMIM5Q71RC9 77 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 ANKRD7Q92527 254 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 DHX36Q9H2U1 1008 aaKnown RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 PICK1Q9NRD5 415 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 MRFAP1Q9Y605 127 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 GJA3Q9Y6H8 435 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 PGRMC1O00264 195 aaKnown RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 MAP3K9P80192 1104 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 TRPC3Q13507 836 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 C6orf163Q5TEZ5 329 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 GUF1Q8N442 669 aaKnown RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 PI4KBQ9UBF8 816 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 ATP2A2P16615 1042 aaKnown RBP7.86□□□□□ -1.15
VCAN-202ENST00000342785 PSMC2P35998 433 aaKnown RBP7.86□□□□□ -1.15
VCAN-202ENST00000342785 CACNB3P54284 484 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 CASP7P55210 303 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 TROAPQ12815 778 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 CDC37Q16543 378 aaPredicted RBP7.86□□□□□ -1.15
VCAN-202ENST00000342785 RAD9BQ6WBX8 426 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 CNKSR1Q969H4 720 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 TRIM9Q9C026 710 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 CCSER1Q9C0I3 900 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 LIMA1Q9UHB6 759 aaKnown RBP7.86□□□□□ -1.15
VCAN-202ENST00000342785 A0A1W2PQC6 194 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 E9PMD0 336 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 PRPF6O94906 941 aaKnown RBP7.86□□□□□ -1.15
VCAN-202ENST00000342785 CAMTA2O94983 1202 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 FAM102BQ5T8I3 360 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 KRT26Q7Z3Y9 468 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 CHP1Q99653 195 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 TMEM260Q9NX78 707 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 CLRN2A0PK11 232 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 LRRC53A6NM62 1247 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 N4BP1O75113 896 aaKnown RBP7.86□□□□□ -1.15
VCAN-202ENST00000342785 IFNB1P01574 187 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 SERPING1P05155 500 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 GAP43P17677 238 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 SLC7A5Q01650 507 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 TAOK1Q7L7X3 1001 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 ADSSL1Q8N142 457 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 HDAC6Q9UBN7 1215 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 ADGRB2O60241 1585 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 LRRN2O75325 713 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 DLATP10515 647 aaKnown RBP7.86□□□□□ -1.15
VCAN-202ENST00000342785 NR1I3Q14994 352 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 ARHGEF1Q92888 912 aaKnown RBP7.86□□□□□ -1.15
VCAN-202ENST00000342785 COA1Q9GZY4 146 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 POLD4Q9HCU8 107 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 GFPT2O94808 682 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 TDP2O95551 362 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 FCER1AP12319 257 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 MESDQ14696 234 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 FAM83BQ5T0W9 1011 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 WDR11Q9BZH6 1224 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 STIM2Q9P246 746 aa7.86□□□□□ -1.15
VCAN-202ENST00000342785 ZBTB5O15062 677 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 LMNB1P20700 586 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 DPYDQ12882 1025 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 FRMPD1Q5SYB0 1578 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 EMBQ6PCB8 327 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 INTS8Q75QN2 995 aaKnown RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 FOXP4Q8IVH2 680 aaPredicted RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 MAGOHBQ96A72 148 aaKnown RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 NACC1Q96RE7 527 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 HOMER3Q9NSC5 361 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 RRP15Q9Y3B9 282 aaKnown RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 HOXA7P31268 230 aaPredicted RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 KCNB1Q14721 858 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 UAP1Q16222 522 aaPredicted RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 VSIG1Q86XK7 387 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 NIM1KQ8IY84 436 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 FLAD1Q8NFF5 587 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 PARP2Q9UGN5 583 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 CCPG1Q9ULG6 757 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 AGTPBP1Q9UPW5 1226 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 HPSEQ9Y251 543 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 CAPN7Q9Y6W3 813 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 FAM196BA6NMK8 535 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 KRT15P19012 456 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 HOXA13P31271 388 aaPredicted RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 LLGL1Q15334 1064 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 ZNF710Q8N1W2 664 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 MLXIPQ9HAP2 919 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 GCNT4Q9P109 453 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 DAAM1Q9Y4D1 1078 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 STK4Q13043 487 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 PRKG1Q13976 671 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 GKAP1Q5VSY0 366 aaPredicted RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 OTUD6AQ7L8S5 288 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 CACNA2D3Q8IZS8 1091 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 MAIP1Q8WWC4 291 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 EIF3CLB5ME19 914 aaKnown RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 MYCNP04198 464 aaPredicted RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 MXRA7P84157 204 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 ANKRD42Q8N9B4 389 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 EIF3CQ99613 913 aaKnown RBP7.85□□□□□ -1.15
VCAN-202ENST00000342785 ZNF577Q9BSK1 485 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 KCNG1Q9UIX4 513 aa7.85□□□□□ -1.15
VCAN-202ENST00000342785 USP17L10C9JJH3 530 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms