RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 BCRP11274 1271 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 GCKP35557 465 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 PDE6BP35913 854 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 SARSP49591 514 aaKnown RBP12.85□□□□□ -0.35
TRAK1-202ENST00000341421 SATB1Q01826 763 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 RASSF7Q02833 373 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 RAD9BQ6WBX8 426 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 HOMEZQ8IX15 550 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 UBL4BQ8N7F7 174 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 KANSL2Q9H9L4 492 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 H2AFZP0C0S5 128 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 FXR1P51114 621 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAK1-202ENST00000341421 ICA1Q05084 483 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 EXOC3L4Q17RC7 722 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 USH1GQ495M9 461 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 H2AFVQ71UI9 128 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 KLHL7Q8IXQ5 586 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 ANKS4BQ8N8V4 417 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 UBLCP1Q8WVY7 318 aaPredicted RBP12.85□□□□□ -0.35
TRAK1-202ENST00000341421 DHX36Q9H2U1 1008 aaKnown RBP12.85□□□□□ -0.35
TRAK1-202ENST00000341421 BUB1O43683 1085 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 ADRA2BP18089 450 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 HPDP32754 393 aaPredicted RBP12.84□□□□□ -0.35
TRAK1-202ENST00000341421 CPSF2Q9P2I0 782 aaKnown RBP12.84□□□□□ -0.35
TRAK1-202ENST00000341421 PCDHB13Q9Y5F0 798 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 SPATA31A1Q5TZJ5 1347 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 BUB1BO60566 1050 aaPredicted RBP12.84□□□□□ -0.35
TRAK1-202ENST00000341421 DESP17661 470 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 NR2F2P24468 414 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 CHURC1Q8WUH1 139 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 CEP63Q96MT8 703 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 COA1Q9GZY4 146 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 ANKZF1Q9H8Y5 726 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 CHMP2AO43633 222 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 GYPCP04921 128 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 GAP43P17677 238 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 SMARCA1P28370 1054 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 TCP10Q12799 353 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 IFT88Q13099 833 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
TRAK1-202ENST00000341421 STAG2Q8N3U4 1231 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 BICD1Q96G01 975 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 AMFRQ9UKV5 643 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 ABCC6O95255 1503 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
TRAK1-202ENST00000341421 EXOC3O60645 756 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 KCNQ4P56696 695 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 RNASE9P60153 205 aaKnown RBP12.84□□□□□ -0.35
TRAK1-202ENST00000341421 ITPK1Q13572 414 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 DAGLBQ8NCG7 672 aa12.84□□□□□ -0.35
TRAK1-202ENST00000341421 MRC1P22897 1456 aa12.83□□□□□ -0.35
TRAK1-202ENST00000341421 KCNK3O14649 394 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 SRGNP10124 158 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 ELF1P32519 619 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 IRAK1P51617 712 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 ANKRD13CQ8N6S4 541 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 GIMAP8Q8ND71 665 aaPredicted RBP12.83□□□□□ -0.36
TRAK1-202ENST00000341421 C7orf25Q9BPX7 421 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 CCDC77Q9BR77 488 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 RAB17Q9H0T7 212 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 EXOC7Q9UPT5 735 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 CALCOCO2Q13137 446 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 GLE1Q53GS7 698 aaKnown RBP12.83□□□□□ -0.36
TRAK1-202ENST00000341421 CDKAL1Q5VV42 579 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 SLC44A5Q8NCS7 719 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 SUPT20HQ8NEM7 779 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 RAD54LQ92698 747 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 TRIM6Q9C030 488 aaPredicted RBP12.83□□□□□ -0.36
TRAK1-202ENST00000341421 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 HPCAL4Q9UM19 191 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 PP2D1A8MPX8 630 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 RGL2O15211 777 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 AFPP02771 609 aaKnown RBP12.83□□□□□ -0.36
TRAK1-202ENST00000341421 PLA2G4BP0C869 781 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 PDIA5Q14554 519 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 LRRC41Q15345 812 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 ALS2CLQ60I27 953 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 AP1ARQ63HQ0 302 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 HOOK3Q86VS8 718 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 RNF10Q8N5U6 811 aaKnown RBP12.83□□□□□ -0.36
TRAK1-202ENST00000341421 KIFAP3Q92845 792 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 CEP95Q96GE4 821 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 IWS1Q96ST2 819 aa12.83□□□□□ -0.36
TRAK1-202ENST00000341421 ACTR5Q9H9F9 607 aaPredicted RBP12.83□□□□□ -0.36
TRAK1-202ENST00000341421 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
TRAK1-202ENST00000341421 EIF3HO15372 352 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAK1-202ENST00000341421 GAS7O60861 476 aa12.82□□□□□ -0.36
TRAK1-202ENST00000341421 CFBP00751 764 aa12.82□□□□□ -0.36
TRAK1-202ENST00000341421 AP3B2Q13367 1082 aa12.82□□□□□ -0.36
TRAK1-202ENST00000341421 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
TRAK1-202ENST00000341421 CEP72Q9P209 647 aa12.82□□□□□ -0.36
TRAK1-202ENST00000341421 CNTNAP4Q9C0A0 1308 aa12.82□□□□□ -0.36
TRAK1-202ENST00000341421 FERP16591 822 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms