RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 PIGSQ96S52 555 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 BSDC1Q9NW68 430 aaPredicted RBP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 EP400Q96L91 3159 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 EIF3HO15372 352 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 TLR2O60603 784 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 HMGB2P26583 209 aaKnown RBP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 HIBADHP31937 336 aaKnown RBP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 GRB10Q13322 594 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 GRM4Q14833 912 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 ECM1Q16610 540 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 NELFCDQ8IXH7 590 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 MMGT1Q8N4V1 131 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 OR2W6PQ8NHA6 318 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 BAP1Q92560 729 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 COA7Q96BR5 231 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 CENPHQ9H3R5 247 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 USO1O60763 962 aaKnown RBP13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 MCM3P25205 808 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 KCNMA1Q12791 1236 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 SF3A3Q12874 501 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 TRAPPC3LQ5T215 181 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 C12orf60Q5U649 245 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 CXorf56Q9H5V9 222 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 ZNF233A6NK53 670 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 MYO1FO00160 1098 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 PALMO75781 387 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 HEXIM1O94992 359 aaKnown RBP13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 PPFIA1Q13136 1202 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 CACNA2D4Q7Z3S7 1137 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 KLHL7Q8IXQ5 586 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 RPGRIP1Q96KN7 1286 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 RNPC3Q96LT9 517 aaKnown RBP13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 PNMA5Q96PV4 448 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 KRT12Q99456 494 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 NUP58Q9BVL2 599 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 HYOU1Q9Y4L1 999 aa13.22□□□□□ -0.29
CCDC144CP-201ENST00000340196 NPHP3-ACAD11A0A0J9YXS1 232 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 BICDL2A1A5D9 508 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 EBAG9O00559 213 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 ERLIN2O94905 339 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 KLRC1P26715 233 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 EHHADHQ08426 723 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 NNTQ13423 1086 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 HGSNATQ68CP4 663 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 DDX42Q86XP3 938 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 AMOTL1Q8IY63 956 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 EFCAB13Q8IY85 973 aa13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC144CP-201ENST00000340196 NDUFAB1O14561 156 aa13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 EDIL3O43854 480 aa13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 HPDP32754 393 aaPredicted RBP13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 POLR2FP61218 127 aaKnown RBP13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 NONOQ15233 471 aaKnown RBP eCLIP13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 CENPPQ6IPU0 288 aa13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 LRRC55Q6ZSA7 311 aa13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 FAM212AQ96EL1 285 aa13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 SH3GL2Q99962 352 aa13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 C7orf25Q9BPX7 421 aa13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 LRRC4CQ9HCJ2 640 aa13.21□□□□□ -0.3
CCDC144CP-201ENST00000340196 TRIM37O94972 964 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 RFC4P35249 363 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 EPHB4P54760 987 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 UBE2SQ16763 222 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 CCDC70Q6NSX1 233 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 NEK8Q86SG6 692 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 RETREG2Q8NC44 543 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 CASKIN2Q8WXE0 1202 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 DONSONQ9NYP3 566 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 HSF2BPO75031 334 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 RASA1P20936 1047 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 ZNF444Q8N0Y2 327 aaPredicted RBP13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 TBC1D5Q92609 795 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 DDX12PQ92771 950 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 ALS2CR12Q96Q35 445 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 ADAMTS1Q9UHI8 967 aa13.2□□□□□ -0.3
CCDC144CP-201ENST00000340196 A0A087X0T9 212 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 NOL4O94818 638 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms