RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TKFCQ3LXA3 575 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 PRAMEF18Q5VWM3 479 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 ANKRD20A12PQ8NF67 263 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 GDAQ9Y2T3 454 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 NR1I3Q14994 352 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 ECM1Q16610 540 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 FILIP1LQ4L180 1135 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 XRRA1Q6P2D8 792 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 TMC6Q7Z403 805 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 FILIP1Q7Z7B0 1213 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 NAP1L5Q96NT1 182 aaPredicted RBP18.17■□□□□ 0.5
HPS1-202ENST00000338546 WDR11Q9BZH6 1224 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 RAVER2Q9HCJ3 691 aaKnown RBP18.17■□□□□ 0.5
HPS1-202ENST00000338546 SPTLC3Q9NUV7 552 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 HOXC10Q9NYD6 342 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 LIMA1Q9UHB6 759 aaKnown RBP18.17■□□□□ 0.5
HPS1-202ENST00000338546 KIAA1024Q9UPX6 916 aa18.17■□□□□ 0.5
HPS1-202ENST00000338546 RBBP6Q7Z6E9 1792 aaKnown RBP18.16■□□□□ 0.5
HPS1-202ENST00000338546 NRDCO43847 1150 aa18.16■□□□□ 0.5
HPS1-202ENST00000338546 ALAS1P13196 640 aa18.16■□□□□ 0.5
HPS1-202ENST00000338546 STX17P56962 302 aa18.16■□□□□ 0.5
HPS1-202ENST00000338546 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
HPS1-202ENST00000338546 REPS2Q8NFH8 660 aa18.16■□□□□ 0.5
HPS1-202ENST00000338546 CACTINQ8WUQ7 758 aaKnown RBP18.16■□□□□ 0.5
HPS1-202ENST00000338546 RIT2Q99578 217 aa18.16■□□□□ 0.5
HPS1-202ENST00000338546 MXRA8Q9BRK3 442 aa18.16■□□□□ 0.5
HPS1-202ENST00000338546 THAP9Q9H5L6 903 aa18.16■□□□□ 0.5
HPS1-202ENST00000338546 TUFT1Q9NNX1 390 aa18.16■□□□□ 0.5
HPS1-202ENST00000338546 RLFQ13129 1914 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 PSMD10O75832 226 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 PLA2G4BP0C869 781 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 CCNE1P24864 410 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
HPS1-202ENST00000338546 HMGCS2P54868 508 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 EHHADHQ08426 723 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 PCNX4Q63HM2 1172 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 OTOP1Q7RTM1 612 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 APTXQ7Z2E3 356 aaKnown RBP18.15■□□□□ 0.5
HPS1-202ENST00000338546 KCNK18Q7Z418 384 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 CATSPER3Q86XQ3 398 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 CYP2W1Q8TAV3 490 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 SYTL5Q8TDW5 730 aaPredicted RBP18.15■□□□□ 0.5
HPS1-202ENST00000338546 DDX12PQ92771 950 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 GJA10Q969M2 543 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 DNM3Q9UQ16 869 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 CSADQ9Y600 493 aa18.15■□□□□ 0.5
HPS1-202ENST00000338546 NFIBO00712 420 aa18.14■□□□□ 0.49
HPS1-202ENST00000338546 MED24O75448 989 aa18.14■□□□□ 0.49
HPS1-202ENST00000338546 EEF1GP26641 437 aaKnown RBP18.14■□□□□ 0.49
HPS1-202ENST00000338546 NOLC1Q14978 699 aaKnown RBP eCLIP18.14■□□□□ 0.49
HPS1-202ENST00000338546 LRCH2Q5VUJ6 765 aa18.14■□□□□ 0.49
HPS1-202ENST00000338546 NCAPH2Q6IBW4 605 aa18.14■□□□□ 0.49
HPS1-202ENST00000338546 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.14■□□□□ 0.49
HPS1-202ENST00000338546 GUF1Q8N442 669 aaKnown RBP18.14■□□□□ 0.49
HPS1-202ENST00000338546 DNAJC19Q96DA6 116 aa18.14■□□□□ 0.49
HPS1-202ENST00000338546 ATG4CQ96DT6 458 aa18.14■□□□□ 0.49
HPS1-202ENST00000338546 ADD3Q9UEY8 706 aaKnown RBP18.14■□□□□ 0.49
HPS1-202ENST00000338546 SNCAIPQ9Y6H5 919 aa18.14■□□□□ 0.49
HPS1-202ENST00000338546 PAPPA2Q9BXP8 1791 aa18.14■□□□□ 0.49
HPS1-202ENST00000338546 POTEB3A0JP26 581 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 POTECB2RU33 542 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 SPATA31C1P0DKV0 1188 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 NF2P35240 595 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 STAT3P40763 770 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 STK4Q13043 487 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 DGKZQ13574 1117 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 SPECC1LQ69YQ0 1117 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 POTEBQ6S5H4 581 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 CCDC65Q8IXS2 484 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 SYT2Q8N9I0 419 aaPredicted RBP18.13■□□□□ 0.49
HPS1-202ENST00000338546 NEK9Q8TD19 979 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 P2RX5Q93086 422 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 INTS13Q9NVM9 706 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 GAS7O60861 476 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 OFD1O75665 1012 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 SFPQP23246 707 aaKnown RBP eCLIP18.13■□□□□ 0.49
HPS1-202ENST00000338546 KCNJ6P48051 423 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 SLC12A3P55017 1021 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 VGLL4Q14135 290 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 CENPPQ6IPU0 288 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 TTI2Q6NXR4 508 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 B3GNT9Q6UX72 402 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 RNF207Q6ZRF8 634 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 FAM114A1Q8IWE2 563 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 CCDC112Q8NEF3 446 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 EIF2AK1Q9BQI3 630 aaKnown RBP18.13■□□□□ 0.49
HPS1-202ENST00000338546 ZNF577Q9BSK1 485 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 TEKT3Q9BXF9 490 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 UBIAD1Q9Y5Z9 338 aa18.13■□□□□ 0.49
HPS1-202ENST00000338546 FRMD3A2A2Y4 597 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 E9PMD0 336 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 KIF20AO95235 890 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 RPS6P62753 249 aaKnown RBP18.12■□□□□ 0.49
HPS1-202ENST00000338546 PPATQ06203 517 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 TBX2Q13207 712 aaPredicted RBP18.12■□□□□ 0.49
HPS1-202ENST00000338546 EPHA7Q15375 998 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms