RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 THSD7AQ9UPZ6 1657 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 TUBB4BP68371 445 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 GFPT1Q06210 699 aaPredicted RBP14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 COASYQ13057 564 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 SPA17Q15506 151 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 PPP4R3AQ6IN85 833 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 CREG2Q8IUH2 290 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 HDAC7Q8WUI4 952 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 CCDC102AQ96A19 550 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 TRERF1Q96PN7 1200 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 PSTPIP2Q9H939 334 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 NLRC4Q9NPP4 1024 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 PCDHA12Q9UN75 941 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 ADAMTSL1Q8N6G6 1762 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 hCG_1984214I3L0E3 225 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 STAT3P40763 770 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 PPP1R2P41236 205 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 SNAP25P60880 206 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 NELFCDQ8IXH7 590 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 ZNF713Q8N859 430 aaPredicted RBP14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 P2RX7Q99572 595 aaKnown RBP14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 CRACR2AQ9BSW2 395 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 TANGO6Q9C0B7 1094 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 DNAJC18Q9H819 358 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 FOCADQ5VW36 1801 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 PPEF1O14829 653 aaPredicted RBP14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 TAL1P17542 331 aaPredicted RBP14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 APOBEC3HQ6NTF7 200 aaKnown RBP14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 CAGE1Q8TC20 777 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 CUL5Q93034 780 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 RAB34Q9BZG1 259 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 SH2D4AQ9H788 454 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 POTEB3A0JP26 581 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 POTECB2RU33 542 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 TRAF5O00463 557 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 ZBTB5O15062 677 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 NCK2O43639 380 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 AKR1B10O60218 316 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 MARCH6O60337 910 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 ZCWPW2Q504Y3 356 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 POTEBQ6S5H4 581 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 TMC4Q7Z404 712 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 EHBP1Q8NDI1 1231 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 RIN2Q8WYP3 895 aaPredicted RBP14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 CRAMP1Q96RY5 1269 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 UBR3Q6ZT12 1888 aa14.88□□□□□ -0.03
TUBA1B-201ENST00000332858 LRRC63Q05C16 580 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 TCP10Q12799 353 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 NFRKBQ6P4R8 1299 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 DEF6Q9H4E7 631 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 PANK4Q9NVE7 773 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 NOL4O94818 638 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 HGSNATQ68CP4 663 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 SEPT12Q8IYM1 358 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 MYOCDQ8IZQ8 938 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 TLR2O60603 784 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 SP8Q8IXZ3 490 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 EXOC4Q96A65 974 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 ZC3H12CQ9C0D7 883 aaKnown RBP14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 COA1Q9GZY4 146 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 POLD4Q9HCU8 107 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 SNX12Q9UMY4 172 aa14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 ATF5Q9Y2D1 282 aaPredicted RBP14.87□□□□□ -0.03
TUBA1B-201ENST00000332858 ANO9A1A5B4 782 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 BUB1O43683 1085 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 MATR3P43243 847 aaKnown RBP eCLIP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 MRPL12P52815 198 aaKnown RBP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 RASSF7Q02833 373 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 QRICH1Q2TAL8 776 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 ASTE1Q2TB18 679 aaPredicted RBP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 FAM26FQ5R3K3 315 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 CCDC84Q86UT8 332 aaPredicted RBP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 MTMR8Q96EF0 704 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 BCAS3Q9H6U6 928 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 PCDHA2Q9Y5H9 948 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 ZC3H4Q9UPT8 1303 aaKnown RBP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 KLRG2A4D1S0 409 aaPredicted RBP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 SYF2O95926 243 aaKnown RBP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 SLC1A4P43007 532 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 TNNT3P45378 269 aaPredicted RBP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 GBP3Q9H0R5 595 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 DMGDHQ9UI17 866 aaKnown RBP14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 ATP6V0A2Q9Y487 856 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 UTRNP46939 3433 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 LTBP1Q14766 1721 aa14.86□□□□□ -0.03
TUBA1B-201ENST00000332858 MYH4Q9Y623 1939 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 LCA5LO95447 670 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 MAGEA1P43355 309 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 PDXDC1Q6P996 788 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 TXLNBQ8N3L3 684 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 JRKLQ9Y4A0 524 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 PCDHA1Q9Y5I3 950 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 COL4A3BPQ9Y5P4 624 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 MED24O75448 989 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 EIF3JO75822 258 aaKnown RBP14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 PSMC6P62333 389 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 CACNA2D4Q7Z3S7 1137 aa14.85□□□□□ -0.03
TUBA1B-201ENST00000332858 TRIM58Q8NG06 486 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms