RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CIITAP33076 1130 aa29.54■■■□□ 2.32
SMDT1-201ENST00000331479 GJA8P48165 433 aa29.54■■■□□ 2.32
SMDT1-201ENST00000331479 IRX5P78411 483 aaPredicted RBP29.54■■■□□ 2.32
SMDT1-201ENST00000331479 MTMR1Q13613 665 aa29.54■■■□□ 2.32
SMDT1-201ENST00000331479 GPRASP2Q96D09 838 aa29.54■■■□□ 2.32
SMDT1-201ENST00000331479 CRISPLD2Q9H0B8 497 aa29.54■■■□□ 2.32
SMDT1-201ENST00000331479 ARP10275 920 aa29.53■■■□□ 2.32
SMDT1-201ENST00000331479 MCTP1Q6DN14 999 aa29.53■■■□□ 2.32
SMDT1-201ENST00000331479 BCAS3Q9H6U6 928 aa29.53■■■□□ 2.32
SMDT1-201ENST00000331479 XPNPEP3Q9NQH7 507 aa29.53■■■□□ 2.32
SMDT1-201ENST00000331479 KIAA0100Q14667 2235 aaKnown RBP29.53■■■□□ 2.32
SMDT1-201ENST00000331479 TDP2O95551 362 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 PGK1P00558 417 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 GNL2Q13823 731 aaKnown RBP29.52■■■□□ 2.32
SMDT1-201ENST00000331479 LETM2Q2VYF4 491 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 NEK8Q86SG6 692 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 NOSTRINQ8IVI9 506 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 KCNH7Q9NS40 1196 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 OGDHLQ9ULD0 1010 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 SYNRGQ9UMZ2 1314 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 VPS37CA5D8V6 355 aaPredicted RBP29.52■■■□□ 2.32
SMDT1-201ENST00000331479 ATP9AO75110 1047 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 TGFB3P10600 412 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 UBA1P22314 1058 aaKnown RBP29.52■■■□□ 2.32
SMDT1-201ENST00000331479 KCNV1Q6PIU1 500 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 TLK2Q86UE8 772 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 LENG9Q96B70 501 aa29.52■■■□□ 2.32
SMDT1-201ENST00000331479 WNT7AO00755 349 aa29.51■■■□□ 2.31
SMDT1-201ENST00000331479 DYNC1LI2O43237 492 aaPredicted RBP29.51■■■□□ 2.31
SMDT1-201ENST00000331479 TFRCP02786 760 aaKnown RBP29.51■■■□□ 2.31
SMDT1-201ENST00000331479 PRR16Q569H4 304 aa29.51■■■□□ 2.31
SMDT1-201ENST00000331479 NIPA1Q7RTP0 329 aa29.51■■■□□ 2.31
SMDT1-201ENST00000331479 PLA2G4DQ86XP0 818 aa29.51■■■□□ 2.31
SMDT1-201ENST00000331479 PKD2L1Q9P0L9 805 aa29.51■■■□□ 2.31
SMDT1-201ENST00000331479 CYP3A7-CYP3A51PA0A087WV96 503 aa29.5■■■□□ 2.31
SMDT1-201ENST00000331479 NKRFO15226 690 aaKnown RBP eCLIP29.5■■■□□ 2.31
SMDT1-201ENST00000331479 SORBS3O60504 671 aa29.5■■■□□ 2.31
SMDT1-201ENST00000331479 ADAMTS4O75173 837 aa29.5■■■□□ 2.31
SMDT1-201ENST00000331479 CYP3A7P24462 503 aa29.5■■■□□ 2.31
SMDT1-201ENST00000331479 UIMC1Q96RL1 719 aa29.5■■■□□ 2.31
SMDT1-201ENST00000331479 TSHZ2Q9NRE2 1034 aa29.5■■■□□ 2.31
SMDT1-201ENST00000331479 MKI67P46013 3256 aaKnown RBP29.5■■■□□ 2.31
SMDT1-201ENST00000331479 MYADML2A6NDP7 307 aa29.49■■■□□ 2.31
SMDT1-201ENST00000331479 CTAGE5O15320 804 aa29.49■■■□□ 2.31
SMDT1-201ENST00000331479 EN2P19622 333 aaPredicted RBP29.49■■■□□ 2.31
SMDT1-201ENST00000331479 GJA9P57773 515 aa29.49■■■□□ 2.31
SMDT1-201ENST00000331479 CDHR1Q96JP9 859 aa29.49■■■□□ 2.31
SMDT1-201ENST00000331479 Q9Y3F1 56 aa29.49■■■□□ 2.31
SMDT1-201ENST00000331479 MAFGO15525 162 aa29.48■■■□□ 2.31
SMDT1-201ENST00000331479 KCNA2P16389 499 aa29.48■■■□□ 2.31
SMDT1-201ENST00000331479 SOX10P56693 466 aa29.48■■■□□ 2.31
SMDT1-201ENST00000331479 ARHGAP1Q07960 439 aa29.48■■■□□ 2.31
SMDT1-201ENST00000331479 OR6J1Q8NGC5 347 aa29.48■■■□□ 2.31
SMDT1-201ENST00000331479 MBOAT7Q96N66 472 aa29.48■■■□□ 2.31
SMDT1-201ENST00000331479 UPF3AQ9H1J1 476 aaKnown RBP29.48■■■□□ 2.31
SMDT1-201ENST00000331479 AGO4Q9HCK5 861 aaKnown RBP29.48■■■□□ 2.31
SMDT1-201ENST00000331479 MTMR6Q9Y217 621 aa29.48■■■□□ 2.31
SMDT1-201ENST00000331479 DOCK5Q9H7D0 1870 aa29.48■■■□□ 2.31
SMDT1-201ENST00000331479 STX6O43752 255 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 CCNT1O60563 726 aaKnown RBP29.47■■■□□ 2.31
SMDT1-201ENST00000331479 GGPS1O95749 300 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 MYCNP04198 464 aaPredicted RBP29.47■■■□□ 2.31
SMDT1-201ENST00000331479 CELF3Q5SZQ8 465 aaKnown RBP29.47■■■□□ 2.31
SMDT1-201ENST00000331479 MOXD1Q6UVY6 613 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 AP5M1Q9H0R1 490 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 SLC37A4O43826 429 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 GH1P01241 217 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 C6orf222P0C671 652 aaPredicted RBP29.47■■■□□ 2.31
SMDT1-201ENST00000331479 ATP2B1P20020 1258 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 LRRC41Q15345 812 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 Q4G0T1 1027 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 MYSM1Q5VVJ2 828 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 PPP4R3AQ6IN85 833 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 FERMT3Q86UX7 667 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 SENP7Q9BQF6 1050 aa29.47■■■□□ 2.31
SMDT1-201ENST00000331479 DDX25Q9UHL0 483 aaKnown RBP29.47■■■□□ 2.31
SMDT1-201ENST00000331479 BEX3Q00994 111 aa29.46■■■□□ 2.31
SMDT1-201ENST00000331479 SETQ01105 290 aaPredicted RBP29.46■■■□□ 2.31
SMDT1-201ENST00000331479 ITGB3BPQ13352 177 aaPredicted RBP29.46■■■□□ 2.31
SMDT1-201ENST00000331479 CYFIP1Q7L576 1253 aa29.46■■■□□ 2.31
SMDT1-201ENST00000331479 DHX37Q8IY37 1157 aaKnown RBP29.46■■■□□ 2.31
SMDT1-201ENST00000331479 KLHDC9Q8NEP7 349 aa29.46■■■□□ 2.31
SMDT1-201ENST00000331479 ANP32AP39687 249 aaKnown RBP29.45■■■□□ 2.31
SMDT1-201ENST00000331479 MNX1P50219 401 aaPredicted RBP29.45■■■□□ 2.31
SMDT1-201ENST00000331479 NKX3-2P78367 333 aa29.45■■■□□ 2.31
SMDT1-201ENST00000331479 NEDD9Q14511 834 aa29.45■■■□□ 2.31
SMDT1-201ENST00000331479 TELO2Q9Y4R8 837 aa29.45■■■□□ 2.31
SMDT1-201ENST00000331479 MSH4O15457 936 aa29.44■■■□□ 2.3
SMDT1-201ENST00000331479 FARP2O94887 1054 aaPredicted RBP29.44■■■□□ 2.3
SMDT1-201ENST00000331479 TOB1P50616 345 aaPredicted RBP29.44■■■□□ 2.3
SMDT1-201ENST00000331479 ARRDC4Q8NCT1 418 aa29.44■■■□□ 2.3
SMDT1-201ENST00000331479 AFG1LQ8WV93 481 aa29.44■■■□□ 2.3
SMDT1-201ENST00000331479 GJA10Q969M2 543 aa29.44■■■□□ 2.3
SMDT1-201ENST00000331479 EMID1Q96A84 441 aaPredicted RBP29.44■■■□□ 2.3
SMDT1-201ENST00000331479 SPC25Q9HBM1 224 aa29.44■■■□□ 2.3
SMDT1-201ENST00000331479 GCFC2P16383 781 aaKnown RBP29.43■■■□□ 2.3
SMDT1-201ENST00000331479 LAMC2Q13753 1193 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 PKP1Q13835 747 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 NBR1Q14596 966 aa29.43■■■□□ 2.3
SMDT1-201ENST00000331479 FSCN1Q16658 493 aaKnown RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms