RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 DNM1LO00429 736 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 MGRN1O60291 552 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 DNAJC8O75937 253 aaPredicted RBP12.41□□□□□ -0.42
GINS3-202ENST00000328514 SERPING1P05155 500 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 HSD17B3P37058 310 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 BCAMP50895 628 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 GUCY2FP51841 1108 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 GFPT1Q06210 699 aaPredicted RBP12.41□□□□□ -0.42
GINS3-202ENST00000328514 CABP7Q86V35 215 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 FAM228AQ86W67 206 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 GUF1Q8N442 669 aaKnown RBP12.41□□□□□ -0.42
GINS3-202ENST00000328514 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
GINS3-202ENST00000328514 KRT12Q99456 494 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 KDM4CQ9H3R0 1056 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 ATP6V0A4Q9HBG4 840 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 TCP11L1Q9NUJ3 509 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 PCDHA6Q9UN73 950 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 PCDHA8Q9Y5H6 950 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 TOGARAM1Q9Y4F4 1720 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 RAD51CO43502 376 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 PALMO75781 387 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 FCER1AP12319 257 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 ERCC3P19447 782 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 ASIC1P78348 528 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 ZNF844Q08AG5 666 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 ORC2Q13416 577 aaPredicted RBP12.41□□□□□ -0.42
GINS3-202ENST00000328514 MTMR3Q13615 1198 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 SLC9C1Q4G0N8 1177 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 TLDC1Q6P9B6 456 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 ZNF34Q8IZ26 560 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 SCFD2Q8WU76 684 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 TATDN2Q93075 761 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 SEC16BQ96JE7 1060 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 MMRN2Q9H8L6 949 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 CEP72Q9P209 647 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
GINS3-202ENST00000328514 NUP98P52948 1817 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 CCDC189A1A4V9 331 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 EZRP15311 586 aaKnown RBP12.4□□□□□ -0.42
GINS3-202ENST00000328514 SCTRP47872 440 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
GINS3-202ENST00000328514 UAP1Q16222 522 aaPredicted RBP12.4□□□□□ -0.42
GINS3-202ENST00000328514 SPDYCQ5MJ68 293 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 LRRC55Q6ZSA7 311 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 MAATS1Q7Z4T9 603 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 ACTRT1Q8TDG2 376 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 CCT6BQ92526 530 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 ANKS1AQ92625 1134 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 N4BP2L2Q92802 583 aaPredicted RBP12.4□□□□□ -0.42
GINS3-202ENST00000328514 CENPTQ96BT3 561 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 LEMD3Q9Y2U8 911 aa12.4□□□□□ -0.42
GINS3-202ENST00000328514 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
GINS3-202ENST00000328514 BUB1O43683 1085 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 PPP2R2AP63151 447 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 TXNRD1Q16881 649 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 RCSD1Q6JBY9 416 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 CCDC125Q86Z20 511 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 CACNA2D3Q8IZS8 1091 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 PROM2Q8N271 834 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 ANKRD13CQ8N6S4 541 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 SEC14L1Q92503 715 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 EEF2KMTQ96G04 330 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 PBKQ96KB5 322 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 PPANQ9NQ55 473 aaKnown RBP12.39□□□□□ -0.43
GINS3-202ENST00000328514 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 TPX2Q9ULW0 747 aaKnown RBP12.39□□□□□ -0.43
GINS3-202ENST00000328514 DCCP43146 1447 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 ATP8B3O60423 1300 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
GINS3-202ENST00000328514 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
GINS3-202ENST00000328514 TLR2O60603 784 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 OR52Z1P0C646 297 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 IL2RBP14784 551 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 GNAQP50148 359 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 SLC8A3P57103 927 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 CRELD2Q6UXH1 353 aaPredicted RBP12.39□□□□□ -0.43
GINS3-202ENST00000328514 TEX11Q8IYF3 940 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 STAG2Q8N3U4 1231 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 CABLES1Q8TDN4 633 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 TBC1D22AQ8WUA7 517 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.39□□□□□ -0.43
GINS3-202ENST00000328514 CNOT10Q9H9A5 744 aaKnown RBP12.39□□□□□ -0.43
GINS3-202ENST00000328514 RIC8AQ9NPQ8 531 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
GINS3-202ENST00000328514 A0A1B0GUL6 1792 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 COL1A1P02452 1464 aaPredicted RBP12.38□□□□□ -0.43
GINS3-202ENST00000328514 LAMB1P07942 1786 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 CYP2D7A0A087X1C5 515 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 SNAP23O00161 211 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 GSTA1P08263 222 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 ZBTB48P10074 688 aaPredicted RBP12.38□□□□□ -0.43
GINS3-202ENST00000328514 KLRC1P26715 233 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 HPDP32754 393 aaPredicted RBP12.38□□□□□ -0.43
GINS3-202ENST00000328514 EHHADHQ08426 723 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 TRADDQ15628 312 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms