RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 MLXIPQ9HAP2 919 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 GTF2IRD1Q9UHL9 959 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 PCDHA11Q9Y5I1 949 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 UNC80Q8N2C7 3258 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 HAS3O00219 553 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 SH2B2O14492 632 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-201ENST00000327154 F2P00734 622 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 HOXD8P13378 290 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-201ENST00000327154 UBA1P22314 1058 aaKnown RBP16.31■□□□□ 0.2
RPAIN-201ENST00000327154 SMARCA1P28370 1054 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 GNAQP50148 359 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 MRPS9P82933 396 aaKnown RBP16.31■□□□□ 0.2
RPAIN-201ENST00000327154 ADGRE1Q14246 886 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 CMTR1Q8N1G2 835 aaKnown RBP16.31■□□□□ 0.2
RPAIN-201ENST00000327154 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
RPAIN-201ENST00000327154 AFAP1L1Q8TED9 768 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 DHX38Q92620 1227 aaKnown RBP16.31■□□□□ 0.2
RPAIN-201ENST00000327154 TMEM87BQ96K49 555 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 LZTS2Q9BRK4 669 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
RPAIN-201ENST00000327154 PLEKHA8P1O95397 391 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 SELPP16109 830 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 RXRAP19793 462 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 IGFBP4P22692 258 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 ZNF200P98182 395 aaPredicted RBP16.3■□□□□ 0.2
RPAIN-201ENST00000327154 GPNMBQ14956 572 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 PPP2R2DQ66LE6 453 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 LRRC2Q9BYS8 371 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 SEC63Q9UGP8 760 aaKnown RBP16.3■□□□□ 0.2
RPAIN-201ENST00000327154 EYSQ5T1H1 3165 aa16.3■□□□□ 0.2
RPAIN-201ENST00000327154 BAZ2BQ9UIF8 2168 aaKnown RBP16.29■□□□□ 0.2
RPAIN-201ENST00000327154 SPATA31C2B4DYI2 1134 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 CKBP12277 381 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 LIFRP42702 1097 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 GNPTABQ3T906 1256 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 LRRC8DQ7L1W4 858 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 RAB11FIP4Q86YS3 637 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 CUL5Q93034 780 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 C16orf70Q9BSU1 422 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 SLC12A7Q9Y666 1083 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 MYH6P13533 1939 aa16.29■□□□□ 0.2
RPAIN-201ENST00000327154 FRMPD4Q14CM0 1322 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 MEIS2O14770 477 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 STAM2O75886 525 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 CALM1P0DP23 149 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 CALM2P0DP24 149 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 CALM3P0DP25 149 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 ICAM3P32942 547 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 PTK7Q13308 1070 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 HIC1Q14526 733 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 CCDC85BQ15834 202 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-201ENST00000327154 BMP2KLQ5H9B9 411 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 INPP4AQ96PE3 977 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-201ENST00000327154 SLC9A7Q96T83 725 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 PRDM6Q9NQX0 595 aa16.28■□□□□ 0.2
RPAIN-201ENST00000327154 KIAA1217Q5T5P2 1943 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 H3BRB1 525 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 PIK3CDO00329 1044 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 NBNO60934 754 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 BAIAP3O94812 1187 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 CA3P07451 260 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 RBL2Q08999 1139 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 SEMA3FQ13275 785 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 NEDD9Q14511 834 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 TRIM71Q2Q1W2 868 aaKnown RBP16.27■□□□□ 0.2
RPAIN-201ENST00000327154 ZNF618Q5T7W0 954 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 CENPQQ7L2Z9 268 aaPredicted RBP16.27■□□□□ 0.2
RPAIN-201ENST00000327154 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 HERC6Q8IVU3 1022 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 WNT8BQ93098 351 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.2
RPAIN-201ENST00000327154 PSTPIP2Q9H939 334 aa16.27■□□□□ 0.2
RPAIN-201ENST00000327154 CHD9Q3L8U1 2897 aa16.27■□□□□ 0.19
RPAIN-201ENST00000327154 PRUNE2Q8WUY3 3088 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 KIF28PB7ZC32 967 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
RPAIN-201ENST00000327154 FIBPO43427 364 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 PARNO95453 639 aaKnown RBP16.26■□□□□ 0.19
RPAIN-201ENST00000327154 LGALS2P05162 132 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 KCNJ6P48051 423 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 RNF20Q5VTR2 975 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 PCNX4Q63HM2 1172 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 METTL7BQ6UX53 244 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 CERS4Q9HA82 394 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 CUL9Q8IWT3 2517 aa16.26■□□□□ 0.19
RPAIN-201ENST00000327154 SCN5AQ14524 2016 aa16.25■□□□□ 0.19
RPAIN-201ENST00000327154 RFXAPO00287 272 aa16.25■□□□□ 0.19
RPAIN-201ENST00000327154 CXCL10P02778 98 aa16.25■□□□□ 0.19
RPAIN-201ENST00000327154 WDR5P61964 334 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms