RNA–Protein interactions for RNA: ENST00000325658.3

PPM1A-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best) BASIC

Gene PPM1A, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-202ENST00000325658 MB21D2Q8IYB1 491 aaPredicted RBP11.8□□□□□ -0.52
PPM1A-202ENST00000325658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.8□□□□□ -0.52
PPM1A-202ENST00000325658 SMCR8Q8TEV9 937 aaPredicted RBP11.8□□□□□ -0.52
PPM1A-202ENST00000325658 GJA10Q969M2 543 aa11.8□□□□□ -0.52
PPM1A-202ENST00000325658 BICDL2A1A5D9 508 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 ALAS1P13196 640 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 HOXA13P31271 388 aaPredicted RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 MAGEA1P43355 309 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 IRAK1P51617 712 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 MORC3Q14149 939 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 FAM133BQ5BKY9 247 aaKnown RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 STAG2Q8N3U4 1231 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 MSANTD4Q8NCY6 345 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 AGXT2Q9BYV1 514 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 A0A087X0B3 334 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 SMIM22K7EJ46 135 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 NFIXQ14938 502 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 CYP26C1Q6V0L0 522 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 KRT25Q7Z3Z0 450 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 VPS52Q8N1B4 723 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 MAP3K14Q99558 947 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 HPCAL4Q9UM19 191 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 C1orf167Q5SNV9 1468 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 FAM208AQ9UK61 1670 aaKnown RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 PDE2AO00408 941 aaPredicted RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 PAX7P23759 505 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 TOB1P50616 345 aaPredicted RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 CYP2J2P51589 502 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 ICA1Q05084 483 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 SLFN13Q68D06 897 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 ARMCX6Q7L4S7 300 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 GSDMBQ8TAX9 411 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 ACTR5Q9H9F9 607 aaPredicted RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 ATP8A2Q9NTI2 1148 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 NKIRAS1Q9NYS0 192 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 KIAA1024Q9UPX6 916 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 B4DLN1 442 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 ABCB4P21439 1286 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 CTNNA2P26232 953 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 CTNNA1P35221 906 aaKnown RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 IFNAR2P48551 515 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 FAM43BQ6ZT52 329 aaPredicted RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 NEK8Q86SG6 692 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 HNRNPLLQ8WVV9 542 aaKnown RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 MRRFQ96E11 262 aaKnown RBP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 SCOCQ9UIL1 159 aa11.79□□□□□ -0.52
PPM1A-202ENST00000325658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.79□□□□□ -0.52
PPM1A-202ENST00000325658 TRIM49BA6NDI0 452 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 SFI1A8K8P3 1242 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 AGPSO00116 658 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 CEP104O60308 925 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 RPN1P04843 607 aaKnown RBP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 PSEN1P49768 467 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 STK32BQ9NY57 414 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 XDHP47989 1333 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 PRPF6O94906 941 aaKnown RBP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 HNRNPCP07910 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 GPBP1Q86WP2 473 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 MFAP3LO75121 409 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 OR52Z1P0C646 297 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 PLCB3Q01970 1234 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 PPP4R3AQ6IN85 833 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 HOOK3Q86VS8 718 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 CCDC197Q8NCU1 140 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 HPS3Q969F9 1004 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 ARL8AQ96BM9 186 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 CSRNP1Q96S65 589 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 BSDC1Q9NW68 430 aaPredicted RBP11.78□□□□□ -0.52
PPM1A-202ENST00000325658 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
PPM1A-202ENST00000325658 TRAF1Q13077 416 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 BIRC3Q13489 604 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 PDCD2Q16342 344 aaPredicted RBP11.77□□□□□ -0.52
PPM1A-202ENST00000325658 MFSD4BQ5TF39 518 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 CNNM4Q6P4Q7 775 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 KCNV2Q8TDN2 545 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 EHMT1Q9H9B1 1298 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 CDHR2Q9BYE9 1310 aa11.77□□□□□ -0.52
PPM1A-202ENST00000325658 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 WNT7AO00755 349 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 CDK8P49336 464 aa11.77□□□□□ -0.53
PPM1A-202ENST00000325658 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms