RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 HAS3O00219 553 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 SLC27A2O14975 620 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 DDAH1O94760 285 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 CA3P07451 260 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 POLR2MP0CAP2 368 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 CCND2P30279 289 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 RFC2P35250 354 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 ZNF200P98182 395 aaPredicted RBP14.3□□□□□ -0.12
TPM3-204ENST00000323144 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 GPNMBQ14956 572 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 DGKDQ16760 1214 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 KIAA0753Q2KHM9 967 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 LRRC8DQ7L1W4 858 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 TMCO2Q7Z6W1 182 aaPredicted RBP14.3□□□□□ -0.12
TPM3-204ENST00000323144 CATIPQ7Z7H3 387 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 DHX37Q8IY37 1157 aaKnown RBP14.3□□□□□ -0.12
TPM3-204ENST00000323144 RPUSD2Q8IZ73 545 aaKnown RBP14.3□□□□□ -0.12
TPM3-204ENST00000323144 AFAP1L1Q8TED9 768 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 TELO2Q9Y4R8 837 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 PCDHA11Q9Y5I1 949 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 PNMA6FA0A0J9YX94 578 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 CASTP20810 708 aaKnown RBP14.29□□□□□ -0.12
TPM3-204ENST00000323144 MRPS9P82933 396 aaKnown RBP14.29□□□□□ -0.12
TPM3-204ENST00000323144 RBL2Q08999 1139 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 BFSP2Q13515 415 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 TRIM71Q2Q1W2 868 aaKnown RBP14.29□□□□□ -0.12
TPM3-204ENST00000323144 CELF3Q5SZQ8 465 aaKnown RBP14.29□□□□□ -0.12
TPM3-204ENST00000323144 MYSM1Q5VVJ2 828 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 TRAF7Q6Q0C0 670 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 VSIG10LQ86VR7 867 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 TRIM50Q86XT4 487 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
TPM3-204ENST00000323144 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 SPATA33Q96N06 139 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 SLC9A7Q96T83 725 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 SPZ1Q9BXG8 430 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 LRRC2Q9BYS8 371 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 FTOQ9C0B1 505 aaKnown RBP eCLIP14.29□□□□□ -0.127e-6■■□□□ 12.9
TPM3-204ENST00000323144 KIAA1671Q9BY89 1806 aa14.29□□□□□ -0.12
TPM3-204ENST00000323144 NBNO60934 754 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 CKBP12277 381 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 IGFBP4P22692 258 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 WDR5P61964 334 aaKnown RBP14.28□□□□□ -0.12
TPM3-204ENST00000323144 DEFB103AP81534 67 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 LAMC2Q13753 1193 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 MBTPS1Q14703 1052 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 CCDC85BQ15834 202 aaPredicted RBP14.28□□□□□ -0.12
TPM3-204ENST00000323144 RALGAPA2Q2PPJ7 1873 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 CREB3L3Q68CJ9 461 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 MICALL1Q8N3F8 863 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 CCDC155Q8N6L0 562 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 C7orf31Q8N865 590 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 CTCFLQ8NI51 663 aaPredicted RBP14.28□□□□□ -0.12
TPM3-204ENST00000323144 KATNAL1Q9BW62 490 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 ANO2Q9NQ90 1003 aa14.28□□□□□ -0.12
TPM3-204ENST00000323144 MYO9BQ13459 2157 aa14.27□□□□□ -0.12
TPM3-204ENST00000323144 CNTNAP5Q8WYK1 1306 aa14.27□□□□□ -0.12
TPM3-204ENST00000323144 hCG_1642624A0A1W2PR95 340 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 LCHNA4D1U4 455 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 RFXAPO00287 272 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 LGALS2P05162 132 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 ACTN1P12814 892 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 SELPP16109 830 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 USP17L6PQ6QN14 398 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 CASC1Q6TDU7 716 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 HERC6Q8IVU3 1022 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 SRBD1Q8N5C6 995 aaKnown RBP14.27□□□□□ -0.13
TPM3-204ENST00000323144 INPP4AQ96PE3 977 aaPredicted RBP14.27□□□□□ -0.13
TPM3-204ENST00000323144 C16orf70Q9BSU1 422 aa14.27□□□□□ -0.13
TPM3-204ENST00000323144 MAP3K20Q9NYL2 800 aaKnown RBP14.27□□□□□ -0.13
TPM3-204ENST00000323144 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 LOXHD1Q8IVV2 1947 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 SP4Q02446 784 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 UBE2SQ16763 222 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 KRT40Q6A162 431 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 NFXL1Q6ZNB6 911 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 MICU3Q86XE3 530 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 RRP36Q96EU6 259 aaKnown RBP14.26□□□□□ -0.13
TPM3-204ENST00000323144 TCEANC2Q96MN5 208 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 THEGQ9P2T0 379 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 XIRP2A4UGR9 3374 aa14.26□□□□□ -0.13
TPM3-204ENST00000323144 CCDC69A6NI79 296 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 MEIS2O14770 477 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 BAIAP3O94812 1187 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 CXCL10P02778 98 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 HOXC8P31273 242 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 MCM5P33992 734 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 TAP1Q03518 808 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 PTK7Q13308 1070 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 NECTIN1Q15223 517 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 ZNF618Q5T7W0 954 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 CNKSR3Q6P9H4 555 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 SAMD3Q8N6K7 520 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 MAP3K14Q99558 947 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
TPM3-204ENST00000323144 SEC63Q9UGP8 760 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms