RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 AS3MTQ9HBK9 375 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 AATFQ9NY61 560 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 MYOM2P54296 1465 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 GATAD2AQ86YP4 633 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 CCPG1Q9ULG6 757 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 NSFL1CQ9UNZ2 370 aaKnown RBP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 DPH6Q7L8W6 267 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 PRDM5Q9NQX1 630 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 RGS12O14924 1447 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 CFAP73A6NFT4 308 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 RNMTO43148 476 aaKnown RBP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 HSP90AA4PQ58FG1 418 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 THOC7Q6I9Y2 204 aaKnown RBP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 NANOGNBQ7Z5D8 188 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 FLAD1Q8NFF5 587 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 GNB5O14775 395 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 RAB20Q9NX57 234 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 ZBBXA8MT70 800 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 TPP2P29144 1249 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 PA2G4Q9UQ80 394 aaKnown RBP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 ZBTB39O15060 712 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 GABPAQ06546 454 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 STK17AQ9UEE5 414 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 SNUPNO95149 360 aaKnown RBP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 CCDC144BQ3MJ40 725 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 KLHL23Q8NBE8 558 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 ZNF233A6NK53 670 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 PPIDQ08752 370 aaKnown RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 PRG3Q9Y2Y8 225 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 SEMA3EO15041 775 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ZBTB7BO15156 539 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 NFKBIAP25963 317 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 LRPAP1P30533 357 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 PDE6CP51160 858 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 MYLK4Q86YV6 388 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 DIS3L2Q8IYB7 885 aaKnown RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 CASC4Q6P4E1 433 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ZBTB8OSQ8IWT0 167 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 FBXL5Q9UKA1 691 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 KDM5CP41229 1560 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 IFT88Q13099 833 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 LARP6Q9BRS8 491 aaKnown RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 KDRP35968 1356 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 TTI1O43156 1089 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 SEMA3FQ13275 785 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 BZW1Q7L1Q6 419 aaKnown RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 CDV3Q9UKY7 258 aaKnown RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 SASH1O94885 1247 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 SLFNL1Q499Z3 407 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 KLHL12Q53G59 568 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 NUGGCQ68CJ6 796 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 NCAPH2Q6IBW4 605 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 MYCT1Q8N699 235 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 FOSP01100 380 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ATP5JP18859 108 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ITGA6P23229 1130 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 KLHL29Q96CT2 875 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 TRIM39Q9HCM9 518 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 A0A1W2PQ27 194 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 A0A1W2PQ64 194 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 A0A1W2PQD8 194 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 KRT14P02533 472 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 LAMC2Q13753 1193 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 KAZNQ674X7 775 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 PIK3AP1Q6ZUJ8 805 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 SKAP1Q86WV1 359 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 MYOCDQ8IZQ8 938 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 SYTL2Q9HCH5 934 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ZNF839A8K0R7 811 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ERVV-2B6SEH9 535 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 E2F5Q15329 346 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 NOSTRINQ8IVI9 506 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ARMCX3Q9UH62 379 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 COL4A3BPQ9Y5P4 624 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 TYW5A2RUC4 315 aaKnown RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 FAM25AB3EWG3 89 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 FAM25CB3EWG5 89 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 FAM25GB3EWG6 89 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 CDC40O60508 579 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 GAS7O60861 476 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 CCT5P48643 541 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 FCHO2Q0JRZ9 810 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ZNF174Q15697 407 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 TRIM50Q86XT4 487 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 SPATA17Q96L03 361 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 UPF3AQ9H1J1 476 aaKnown RBP10.48□□□□□ -0.73
COL12A1-201ENST00000322507 TSPOAP1O95153 1857 aa10.48□□□□□ -0.73
COL12A1-201ENST00000322507 ATP7BP35670 1465 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 STAM2O75886 525 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 ICA1LQ8NDH6 482 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 B3GALT6Q96L58 329 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 LRRC37BQ96QE4 947 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 ALCAMQ13740 583 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 NLRP4Q96MN2 994 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 TRIM45Q9H8W5 580 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-201ENST00000322507 SP100P23497 879 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-201ENST00000322507 KRT76Q01546 638 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 TTC25Q96NG3 672 aa10.47□□□□□ -0.73
COL12A1-201ENST00000322507 SNX5Q9Y5X3 404 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms