RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TRIM66O15016 1216 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 HYIQ5T013 277 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 KRT79Q5XKE5 535 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 HAUS3Q68CZ6 603 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 NFRKBQ6P4R8 1299 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 EMBQ6PCB8 327 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 MTMR8Q96EF0 704 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 GPR101Q96P66 508 aaPredicted RBP9.64□□□□□ -0.87
CLK1-201ENST00000321356 TSG101Q99816 390 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 NUCKS1Q9H1E3 243 aaKnown RBP9.64□□□□□ -0.87
CLK1-201ENST00000321356 MTMR4Q9NYA4 1195 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 CEP72Q9P209 647 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 GREB1LQ9C091 1923 aaPredicted RBP9.63□□□□□ -0.87
CLK1-201ENST00000321356 TLR2O60603 784 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 NOL4O94818 638 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 SLC1A4P43007 532 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 CLK2P49760 499 aaKnown RBP9.63□□□□□ -0.87
CLK1-201ENST00000321356 EPHB4P54760 987 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 MARSP56192 900 aaKnown RBP9.63□□□□□ -0.87
CLK1-201ENST00000321356 GPSM2P81274 684 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 GABPAQ06546 454 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 COASYQ13057 564 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 ECM1Q16610 540 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 FAM98CQ17RN3 349 aaKnown RBP9.63□□□□□ -0.87
CLK1-201ENST00000321356 KLHDC7AQ5VTJ3 777 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 MYOCDQ8IZQ8 938 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 FAM76AQ8TAV0 307 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 CAVIN3Q969G5 261 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 COA7Q96BR5 231 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 NOX5Q96PH1 765 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 STIM2Q9P246 746 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 RNF14Q9UBS8 474 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 TSKSQ9UJT2 592 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 COL4A3BPQ9Y5P4 624 aa9.63□□□□□ -0.87
CLK1-201ENST00000321356 LTBP1Q14766 1721 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 A0A0U1RQG5 324 aaPredicted RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 GOLGA6CA6NDK9 693 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CAPN15O75808 1086 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CLSTN1O94985 981 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 SERPING1P05155 500 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 EPB41P11171 864 aaKnown RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 FKBP3Q00688 224 aaKnown RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 ATP2B2Q01814 1243 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 GFPT1Q06210 699 aaPredicted RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 NNTQ13423 1086 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 SF3B2Q13435 895 aaKnown RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 LRRC41Q15345 812 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 GLE1Q53GS7 698 aaKnown RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 SND1Q7KZF4 910 aaKnown RBP eCLIP9.62□□□□□ -0.87
CLK1-201ENST00000321356 TRIM59Q8IWR1 403 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 ZC3H3Q8IXZ2 948 aaKnown RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 HAS1Q92839 578 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 DRC1Q96MC2 740 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CEP63Q96MT8 703 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 FRMPD2Q68DX3 1309 aaPredicted RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 KIF13BQ9NQT8 1826 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 PNMA6FA0A0J9YX94 578 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 GOLGA8KD6RF30 607 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 NCK2O43639 380 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 PPP1R11O60927 126 aaPredicted RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 UFL1O94874 794 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 ATP2B4P23634 1241 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CXCR5P32302 372 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 PAFAH1B1P43034 410 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CORO7P57737 925 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 RASSF7Q02833 373 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 ZNF543Q08ER8 600 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CRY2Q49AN0 593 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 SLC9C1Q4G0N8 1177 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 FAM26FQ5R3K3 315 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 FAM83BQ5T0W9 1011 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 ALS2CLQ60I27 953 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CACNA2D4Q7Z3S7 1137 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 C10orf67Q8IYJ2 551 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CNBD1Q8NA66 436 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CERKQ8TCT0 537 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 JMJD4Q9H9V9 463 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 RBM12Q9NTZ6 932 aaKnown RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 SMARCAL1Q9NZC9 954 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 EHD2Q9NZN4 543 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 CCNL1Q9UK58 526 aaPredicted RBP9.62□□□□□ -0.87
CLK1-201ENST00000321356 PCDHA2Q9Y5H9 948 aa9.62□□□□□ -0.87
CLK1-201ENST00000321356 QSER1Q2KHR3 1735 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 MYO3BQ8WXR4 1341 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 LRRC37AA6NMS7 1700 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 SLC26A4O43511 780 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 GNA14O95837 355 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 GCFC2P16383 781 aaKnown RBP9.61□□□□□ -0.87
CLK1-201ENST00000321356 TNNI2P48788 182 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 PPFIA1Q13136 1202 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 NAB2Q15742 525 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 CFAP221Q4G0U5 840 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 MFSD14BQ5SR56 506 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 CCDC181Q5TID7 509 aa9.61□□□□□ -0.87
CLK1-201ENST00000321356 SFMBT2Q5VUG0 894 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms