RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 RGPD1P0DJD0 1748 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 UBR1Q8IWV7 1749 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 FOXP2O15409 715 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 BUB1BO60566 1050 aaPredicted RBP13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 PLS1Q14651 629 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 SNCBQ16143 134 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 TMEM47Q9BQJ4 181 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 AP1M1Q9BXS5 423 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 POLD4Q9HCU8 107 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 PCDHA6Q9UN73 950 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 NOVA2Q9UNW9 492 aaKnown RBP13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 PCDHA8Q9Y5H6 950 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 BTDP43251 543 aa13.96□□□□□ -0.18
DNMT3A-202ENST00000321117 DHX9Q08211 1270 aaKnown RBP13.96□□□□□ -0.18
DNMT3A-202ENST00000321117 CUL1Q13616 776 aa13.96□□□□□ -0.18
DNMT3A-202ENST00000321117 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.96□□□□□ -0.18
DNMT3A-202ENST00000321117 POTEMA6NI47 508 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 LRRC10BA6NIK2 292 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 GUCY1A3Q02108 690 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 DIXDC1Q155Q3 683 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 TAOK1Q7L7X3 1001 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 METTL14Q9HCE5 456 aaKnown RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 FAM114A2Q9NRY5 505 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 FAM53CQ9NYF3 392 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 DMGDHQ9UI17 866 aaKnown RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 MINPP1Q9UNW1 487 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ATP6V0A2Q9Y487 856 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 HOXA7P31268 230 aaPredicted RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ARHGAP44Q17R89 818 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 PDXDC1Q6P996 788 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ZNF34Q8IZ26 560 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ERGIC2Q96RQ1 377 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ATP8A1Q9Y2Q0 1164 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ARHGAP23Q9P227 1491 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 KRT14P02533 472 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 NT5C2P49902 561 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ALKBH5Q6P6C2 394 aaKnown RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 PROM2Q8N271 834 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 EMILIN3Q9NT22 766 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 RBM12Q9NTZ6 932 aaKnown RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 PACSIN2Q9UNF0 486 aaPredicted RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 CCDC169A6NNP5 214 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 TULP2O00295 520 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 PLEKP08567 350 aaPredicted RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 FGFR2P21802 821 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 CLUL1Q15846 466 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 FBXW10Q5XX13 1052 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 CCDC105Q8IYK2 499 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 SLC44A5Q8NCS7 719 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 IFT74Q96LB3 600 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ATP6V1G3Q96LB4 118 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 EDEM3Q9BZQ6 932 aa13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 ACTR5Q9H9F9 607 aaPredicted RBP13.95□□□□□ -0.18
DNMT3A-202ENST00000321117 PPP1R37O75864 691 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 LACTBP83111 547 aaPredicted RBP13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 SEPT2Q15019 361 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 C10orf76Q5T2E6 689 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 TMC4Q7Z404 712 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 MSL3Q8N5Y2 521 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 MYCT1Q8N699 235 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 UHMK1Q8TAS1 419 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 FAM84BQ96KN1 310 aaPredicted RBP13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 PLAGL2Q9UPG8 496 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 A0A1W2PQJ5 194 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 AFPP02771 609 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 CCDC174Q6PII3 467 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 SPATA20Q8TB22 786 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 C7orf25Q9BPX7 421 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 NKIRAS1Q9NYS0 192 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 CAPN6Q9Y6Q1 641 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 MEFVO15553 781 aaPredicted RBP13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 CTNND1O60716 968 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 ATP5DP30049 168 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 ARMC9Q7Z3E5 817 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 CCDC197Q8NCU1 140 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 ZIM3Q96PE6 472 aa13.94□□□□□ -0.18
DNMT3A-202ENST00000321117 HGSO14964 777 aaPredicted RBP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 CHMP2AO43633 222 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 ABL1P00519 1130 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 MFSD14BQ5SR56 506 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 BRINP3Q76B58 766 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 NLRP14Q86W24 1093 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 HDAC9Q9UKV0 1011 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 SSU72P8A0A1W2PR75 194 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 GRID2IPA4D2P6 1211 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 CCDC188H7C350 402 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 SLC8A1P32418 973 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 TRAF1Q13077 416 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 CNBD1Q8NA66 436 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 GJA10Q969M2 543 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 NSUN4Q96CB9 384 aaKnown RBP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 TAF1DQ9H5J8 278 aaPredicted RBP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 TMOD2Q9NZR1 351 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 PARP2Q9UGN5 583 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 GGA1Q9UJY5 639 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms