RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 USO1O60763 962 aaKnown RBP28.08■■■□□ 2.09
HOXB3-201ENST00000311626 TTLL1O95922 423 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 MAGEA1P43355 309 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 ARID5AQ03989 594 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 RAB34Q9BZG1 259 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 HPCAL4Q9UM19 191 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 KIAA1024Q9UPX6 916 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 TACC1O75410 805 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 SYF2O95926 243 aaKnown RBP28.07■■■□□ 2.08
HOXB3-201ENST00000311626 DDR1Q08345 913 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 PDIA5Q14554 519 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 CCDC40Q4G0X9 1142 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 COBLL1Q53SF7 1204 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 TDRD12Q587J7 1177 aaKnown RBP28.07■■■□□ 2.08
HOXB3-201ENST00000311626 LRRC1Q9BTT6 524 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 FAM204AQ9H8W3 233 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 POLD4Q9HCU8 107 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 PCDHAC2Q9Y5I4 1007 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 SNHG28P0DPA3 235 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 TAL1P17542 331 aaPredicted RBP28.07■■■□□ 2.08
HOXB3-201ENST00000311626 SLC1A4P43007 532 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 NAP1L1P55209 391 aaKnown RBP28.07■■■□□ 2.08
HOXB3-201ENST00000311626 CDK17Q00537 523 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 CERS3Q8IU89 383 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 MYOCDQ8IZQ8 938 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 CERKQ8TCT0 537 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 SERPINB13Q9UIV8 391 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 PCDHA12Q9UN75 941 aa28.07■■■□□ 2.08
HOXB3-201ENST00000311626 IGKV6D-41A0A0C4DH26 115 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 POTEB3A0JP26 581 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 POTECB2RU33 542 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 SHMT1P34896 483 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 NFIAQ12857 509 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 POTEBQ6S5H4 581 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 TBC1D22AQ8WUA7 517 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 PSTPIP2Q9H939 334 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 DMGDHQ9UI17 866 aaKnown RBP28.06■■■□□ 2.08
HOXB3-201ENST00000311626 RNF40O75150 1001 aa28.06■■■□□ 2.08
HOXB3-201ENST00000311626 ANO9A1A5B4 782 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 HNRNPH3P31942 346 aaKnown RBP28.05■■■□□ 2.08
HOXB3-201ENST00000311626 EHHADHQ08426 723 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 FAM71BQ8TC56 605 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 CUL5Q93034 780 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 TSG101Q99816 390 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 LRRC63Q05C16 580 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 PDXDC1Q6P996 788 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 CCNI2Q6ZMN8 369 aaPredicted RBP28.05■■■□□ 2.08
HOXB3-201ENST00000311626 MTMR8Q96EF0 704 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 TRIM34Q9BYJ4 488 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 TSGA10Q9BZW7 698 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 JRKLQ9Y4A0 524 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 TAF1LQ8IZX4 1826 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 BBOX1O75936 387 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 SKIDA1Q1XH10 827 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 TRIM58Q8NG06 486 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 MS4A14Q96JA4 679 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 SELENOOQ9BVL4 669 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 LCMT1Q9UIC8 334 aa28.05■■■□□ 2.08
HOXB3-201ENST00000311626 TCP10Q12799 353 aa28.04■■■□□ 2.08
HOXB3-201ENST00000311626 FAM26FQ5R3K3 315 aa28.04■■■□□ 2.08
HOXB3-201ENST00000311626 OSBPL9Q96SU4 736 aa28.04■■■□□ 2.08
HOXB3-201ENST00000311626 LSM14BQ9BX40 385 aaKnown RBP28.04■■■□□ 2.08
HOXB3-201ENST00000311626 TUBBP07437 444 aa28.04■■■□□ 2.08
HOXB3-201ENST00000311626 GGCXP38435 758 aa28.04■■■□□ 2.08
HOXB3-201ENST00000311626 CLK2P49760 499 aaKnown RBP28.04■■■□□ 2.08
HOXB3-201ENST00000311626 IRX5P78411 483 aaPredicted RBP28.04■■■□□ 2.08
HOXB3-201ENST00000311626 CCDC84Q86UT8 332 aaPredicted RBP28.04■■■□□ 2.08
HOXB3-201ENST00000311626 PSD3Q9NYI0 1048 aa28.04■■■□□ 2.08
HOXB3-201ENST00000311626 ACTN2P35609 894 aa28.03■■■□□ 2.08
HOXB3-201ENST00000311626 POLR2FP61218 127 aaKnown RBP28.03■■■□□ 2.08
HOXB3-201ENST00000311626 ORC2Q13416 577 aaPredicted RBP28.03■■■□□ 2.08
HOXB3-201ENST00000311626 KCNQ5Q9NR82 932 aa28.03■■■□□ 2.08
HOXB3-201ENST00000311626 COL4A3BPQ9Y5P4 624 aa28.03■■■□□ 2.08
HOXB3-201ENST00000311626 TLR2O60603 784 aa28.03■■■□□ 2.08
HOXB3-201ENST00000311626 FGFR1OPO95684 399 aaKnown RBP28.03■■■□□ 2.08
HOXB3-201ENST00000311626 HGSNATQ68CP4 663 aa28.03■■■□□ 2.08
HOXB3-201ENST00000311626 ZC3H4Q9UPT8 1303 aaKnown RBP28.02■■■□□ 2.08
HOXB3-201ENST00000311626 NOL4O94818 638 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 HERC4Q5GLZ8 1057 aaPredicted RBP28.02■■■□□ 2.08
HOXB3-201ENST00000311626 PPP4R3AQ6IN85 833 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 CDC42EP5Q6NZY7 148 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 DNAAF5Q86Y56 855 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 PODXL2Q9NZ53 605 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 MYH7BA7E2Y1 1941 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 A0A0U1RQG5 324 aaPredicted RBP28.02■■■□□ 2.08
HOXB3-201ENST00000311626 hCG_1984214I3L0E3 225 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 ZBTB5O15062 677 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 GPBP1Q86WP2 473 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 ZNF713Q8N859 430 aaPredicted RBP28.02■■■□□ 2.08
HOXB3-201ENST00000311626 SPATA4Q8NEY3 305 aa28.02■■■□□ 2.08
HOXB3-201ENST00000311626 TARSL2A2RTX5 802 aaKnown RBP28.01■■■□□ 2.07
HOXB3-201ENST00000311626 MEIS1O00470 390 aa28.01■■■□□ 2.07
HOXB3-201ENST00000311626 MRPL12P52815 198 aaKnown RBP28.01■■■□□ 2.07
HOXB3-201ENST00000311626 LTBP4Q8N2S1 1624 aa28.01■■■□□ 2.07
HOXB3-201ENST00000311626 PPEF1O14829 653 aaPredicted RBP28.01■■■□□ 2.07
HOXB3-201ENST00000311626 TOM1O60784 492 aa28.01■■■□□ 2.07
HOXB3-201ENST00000311626 PLA2G4BP0C869 781 aa28.01■■■□□ 2.07
HOXB3-201ENST00000311626 FKBP3Q00688 224 aaKnown RBP28.01■■■□□ 2.07
HOXB3-201ENST00000311626 MAP9Q49MG5 647 aa28.01■■■□□ 2.07
HOXB3-201ENST00000311626 ZCWPW2Q504Y3 356 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms