RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 NOD2Q9HC29 1040 aa17.49■□□□□ 0.39
CACNB3-201ENST00000301050 PAFAH1B1P43034 410 aa17.49■□□□□ 0.39
CACNB3-201ENST00000301050 ENAHQ8N8S7 591 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-201ENST00000301050 RBM17Q96I25 401 aaKnown RBP17.49■□□□□ 0.39
CACNB3-201ENST00000301050 ZSCAN10Q96SZ4 725 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-201ENST00000301050 TTYH3Q9C0H2 523 aa17.49■□□□□ 0.39
CACNB3-201ENST00000301050 EPB41L5Q9HCM4 733 aa17.49■□□□□ 0.39
CACNB3-201ENST00000301050 SPATS2LQ9NUQ6 558 aaKnown RBP17.49■□□□□ 0.39
CACNB3-201ENST00000301050 NID2Q14112 1375 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 ANKRD33BA6NCL7 494 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 TRIM49BA6NDI0 452 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 H7C1D1 291 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 POLRMTO00411 1230 aaKnown RBP17.48■□□□□ 0.39
CACNB3-201ENST00000301050 TRAPPC3O43617 180 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 CLSTN1O94985 981 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 LDHBP07195 334 aaKnown RBP17.48■□□□□ 0.39
CACNB3-201ENST00000301050 ELF3P78545 371 aaPredicted RBP17.48■□□□□ 0.39
CACNB3-201ENST00000301050 DIXDC1Q155Q3 683 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 GRIPAP1Q4V328 841 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 ZNF804AQ7Z570 1209 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 ARFGAP2Q8N6H7 521 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 LMBR1Q8WVP7 490 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 TATDN2Q93075 761 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 GDAQ9Y2T3 454 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 RASSF10A6NK89 507 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 NCK2O43639 380 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 PRCPP42785 496 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 GUCY2DQ02846 1103 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 NBPF9Q3BBW0 867 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 SPTY2D1Q68D10 685 aaPredicted RBP17.48■□□□□ 0.39
CACNB3-201ENST00000301050 CDCA2Q69YH5 1023 aaPredicted RBP17.48■□□□□ 0.39
CACNB3-201ENST00000301050 MAATS1Q7Z4T9 603 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 NSMCE1Q8WV22 266 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 STAMBPL1Q96FJ0 436 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 SH2D4AQ9H788 454 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 TMBIM4Q9HC24 238 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 BATF3Q9NR55 127 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 BAIAP2L1Q9UHR4 511 aa17.48■□□□□ 0.39
CACNB3-201ENST00000301050 BACH1O14867 736 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 DNAJC8O75937 253 aaPredicted RBP17.47■□□□□ 0.39
CACNB3-201ENST00000301050 HEXIM1O94992 359 aaKnown RBP17.47■□□□□ 0.39
CACNB3-201ENST00000301050 KLK7P49862 253 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 ADCY2Q08462 1091 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 ZNF658Q5TYW1 1059 aaPredicted RBP17.47■□□□□ 0.39
CACNB3-201ENST00000301050 CACNA2D3Q8IZS8 1091 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 FANCBQ8NB91 859 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 HVCN1Q96D96 273 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 MTRQ99707 1265 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 SH3GL3Q99963 347 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 SLC12A6Q9UHW9 1150 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 PLAAQ9Y263 795 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 LAMB1P07942 1786 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 USO1O60763 962 aaKnown RBP17.47■□□□□ 0.39
CACNB3-201ENST00000301050 TRIM21P19474 475 aaKnown RBP17.47■□□□□ 0.39
CACNB3-201ENST00000301050 ICA1Q05084 483 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 MYO1EQ12965 1108 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 SPA17Q15506 151 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 FAM47AQ5JRC9 791 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 TMTC2Q8N394 836 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 WDR66Q8TBY9 1149 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 CUL5Q93034 780 aa17.47■□□□□ 0.39
CACNB3-201ENST00000301050 THOC1Q96FV9 657 aaKnown RBP17.47■□□□□ 0.39
CACNB3-201ENST00000301050 NMT2O60551 498 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 BUB1BO60566 1050 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-201ENST00000301050 ZBED6P86452 979 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 CDC37Q16543 378 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-201ENST00000301050 AP1ARQ63HQ0 302 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 TAX1BP1Q86VP1 789 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 MTA3Q9BTC8 594 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 EBF2Q9HAK2 575 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 C5orf60A6NFR6 353 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 B4DLN1 442 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 PLEKP08567 350 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-201ENST00000301050 USP17L8P0C7I0 530 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 PEX19P40855 299 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 IFIT1BQ5T764 474 aaKnown RBP17.46■□□□□ 0.39
CACNB3-201ENST00000301050 MSL1Q68DK7 614 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 SH3RF3Q8TEJ3 882 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-201ENST00000301050 CCT6BQ92526 530 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 MS4A14Q96JA4 679 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 MCM9Q9NXL9 1143 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 GGA1Q9UJY5 639 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
CACNB3-201ENST00000301050 MYH10P35580 1976 aa17.46■□□□□ 0.39
CACNB3-201ENST00000301050 WNT7AO00755 349 aa17.45■□□□□ 0.38
CACNB3-201ENST00000301050 GTPBP6O43824 516 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-201ENST00000301050 SRGNP10124 158 aa17.45■□□□□ 0.38
CACNB3-201ENST00000301050 TMOD1P28289 359 aa17.45■□□□□ 0.38
CACNB3-201ENST00000301050 DNM2P50570 870 aa17.45■□□□□ 0.38
CACNB3-201ENST00000301050 EARS2Q5JPH6 523 aaKnown RBP17.45■□□□□ 0.38
CACNB3-201ENST00000301050 HIBCHQ6NVY1 386 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-201ENST00000301050 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-201ENST00000301050 CASKIN2Q8WXE0 1202 aa17.45■□□□□ 0.38
CACNB3-201ENST00000301050 FERMT2Q96AC1 680 aa17.45■□□□□ 0.38
CACNB3-201ENST00000301050 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
CACNB3-201ENST00000301050 NUP58Q9BVL2 599 aa17.45■□□□□ 0.38
CACNB3-201ENST00000301050 IFIH1Q9BYX4 1025 aaKnown RBP17.45■□□□□ 0.38
CACNB3-201ENST00000301050 ATP8A2Q9NTI2 1148 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms