RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
VWA3A-201ENST00000299840 MRFAP1L1Q96HT8 127 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 GPCPD1Q9NPB8 672 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 CTDP1Q9Y5B0 961 aaPredicted RBP12.17□□□□□ -0.46
VWA3A-201ENST00000299840 IVNS1ABPQ9Y6Y0 642 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
VWA3A-201ENST00000299840 ADCY3O60266 1144 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 ACTN2P35609 894 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 TROAPQ12815 778 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 IKQ13123 557 aaPredicted RBP12.17□□□□□ -0.46
VWA3A-201ENST00000299840 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 SGMS1Q86VZ5 419 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 FBXL16Q8N461 479 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 ZNF333Q96JL9 665 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 SENP2Q9HC62 589 aa12.17□□□□□ -0.46
VWA3A-201ENST00000299840 BAZ2BQ9UIF8 2168 aaKnown RBP12.17□□□□□ -0.46
VWA3A-201ENST00000299840 DDAH1O94760 285 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 ZRANB2O95218 330 aaKnown RBP eCLIP12.16□□□□□ -0.46
VWA3A-201ENST00000299840 IGHA2P01877 340 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 PYGLP06737 847 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
VWA3A-201ENST00000299840 SLC9C1Q4G0N8 1177 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 SNRNP48Q6IEG0 339 aaKnown RBP12.16□□□□□ -0.46
VWA3A-201ENST00000299840 ARL10Q8N8L6 244 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 BICD1Q96G01 975 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 APBA2Q99767 749 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
VWA3A-201ENST00000299840 FBXO40Q9UH90 709 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 LCTP09848 1927 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 ICAM1P05362 532 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 FCER1AP12319 257 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 PLA2G4AP47712 749 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 KCNV1Q6PIU1 500 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 LRRC31Q6UY01 552 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 CATIPQ7Z7H3 387 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
VWA3A-201ENST00000299840 IL17RAQ96F46 866 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 PSD3Q9NYI0 1048 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 RIPK3Q9Y572 518 aa12.16□□□□□ -0.46
VWA3A-201ENST00000299840 PSMA5P28066 241 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 SLC16A2P36021 539 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 IFT88Q13099 833 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 SNX1Q13596 522 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 TRIM42Q8IWZ5 723 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 CPXCR1Q8N123 301 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 DIS3Q9Y2L1 958 aaKnown RBP12.15□□□□□ -0.46
VWA3A-201ENST00000299840 FHOD1Q9Y613 1164 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
VWA3A-201ENST00000299840 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 HSP90B2PQ58FF3 399 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 TADA2BQ86TJ2 420 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 TAX1BP1Q86VP1 789 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 ZNF654Q8IZM8 581 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 MMP19Q99542 508 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 IRX2Q9BZI1 471 aaPredicted RBP12.15□□□□□ -0.46
VWA3A-201ENST00000299840 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
VWA3A-201ENST00000299840 SLC5A4Q9NY91 659 aa12.15□□□□□ -0.46
VWA3A-201ENST00000299840 KIAA0100Q14667 2235 aaKnown RBP12.14□□□□□ -0.47
VWA3A-201ENST00000299840 ZSCAN9O15535 394 aaPredicted RBP12.14□□□□□ -0.47
VWA3A-201ENST00000299840 HMGCRP04035 888 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 CALM1P0DP23 149 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 CALM2P0DP24 149 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 CALM3P0DP25 149 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 CYP2B6P20813 491 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 TPP2P29144 1249 aaPredicted RBP12.14□□□□□ -0.47
VWA3A-201ENST00000299840 ADORA2AP29274 412 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 UBXN2AP68543 259 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 OLFML2BQ68BL8 750 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 DNAJC25-GNG10A0A024R161 153 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 CCDC69A6NI79 296 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 KLRF2D3W0D1 207 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 KIF2AO00139 706 aaPredicted RBP12.14□□□□□ -0.47
VWA3A-201ENST00000299840 RCAN1P53805 252 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 KCTD2Q14681 263 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 ADGRF4Q8IZF3 695 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 C3orf20Q8ND61 904 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 AGBL1Q96MI9 1066 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 JAKMIP1Q96N16 626 aaKnown RBP12.14□□□□□ -0.47
VWA3A-201ENST00000299840 AGXT2Q9BYV1 514 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 UBA5Q9GZZ9 404 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 RIOX1Q9H6W3 641 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 ACAD9Q9H845 621 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 MCM8Q9UJA3 840 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 G3BP2Q9UN86 482 aaKnown RBP12.14□□□□□ -0.47
VWA3A-201ENST00000299840 MCM3APO60318 1980 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 FRMPD3Q5JV73 1810 aa12.14□□□□□ -0.47
VWA3A-201ENST00000299840 A0A087WUV0 522 aaPredicted RBP12.13□□□□□ -0.47
VWA3A-201ENST00000299840 COBLO75128 1261 aa12.13□□□□□ -0.47
VWA3A-201ENST00000299840 RPS6KB1P23443 525 aa12.13□□□□□ -0.47
VWA3A-201ENST00000299840 ZNF792Q3KQV3 632 aa12.13□□□□□ -0.47
VWA3A-201ENST00000299840 MAP3K21Q5TCX8 1036 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms