RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 RAB30Q15771 203 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 ADCK5Q3MIX3 580 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 MAFAQ8NHW3 353 aaPredicted RBP18.86■□□□□ 0.61
NPM1-201ENST00000296930 IL31RAQ8NI17 732 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 PIBF1Q8WXW3 757 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 KAT2BQ92831 832 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 KATNAL1Q9BW62 490 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 MSRAQ9UJ68 235 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 EYSQ5T1H1 3165 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 LIFRP42702 1097 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 GRIN2CQ14957 1233 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 PTGISQ16647 500 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 VWCEQ96DN2 955 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 SEC63Q9UGP8 760 aaKnown RBP18.86■□□□□ 0.61
NPM1-201ENST00000296930 SLC4A7Q9Y6M7 1214 aa18.86■□□□□ 0.61
NPM1-201ENST00000296930 DLL1O00548 723 aa18.85■□□□□ 0.61
NPM1-201ENST00000296930 CALM1P0DP23 149 aa18.85■□□□□ 0.61
NPM1-201ENST00000296930 CALM2P0DP24 149 aa18.85■□□□□ 0.61
NPM1-201ENST00000296930 CALM3P0DP25 149 aa18.85■□□□□ 0.61
NPM1-201ENST00000296930 CELF3Q5SZQ8 465 aaKnown RBP18.85■□□□□ 0.61
NPM1-201ENST00000296930 MYSM1Q5VVJ2 828 aa18.85■□□□□ 0.61
NPM1-201ENST00000296930 DEFB128Q7Z7B8 93 aa18.85■□□□□ 0.61
NPM1-201ENST00000296930 CCDC155Q8N6L0 562 aa18.85■□□□□ 0.61
NPM1-201ENST00000296930 CUL9Q8IWT3 2517 aa18.85■□□□□ 0.61
NPM1-201ENST00000296930 STAM2O75886 525 aa18.84■□□□□ 0.61
NPM1-201ENST00000296930 IQCF3P0C7M6 154 aa18.84■□□□□ 0.61
NPM1-201ENST00000296930 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.84■□□□□ 0.61
NPM1-201ENST00000296930 CAGE1Q8TC20 777 aa18.84■□□□□ 0.61
NPM1-201ENST00000296930 CHD9Q3L8U1 2897 aa18.84■□□□□ 0.61
NPM1-201ENST00000296930 FRMPD4Q14CM0 1322 aa18.84■□□□□ 0.61
NPM1-201ENST00000296930 ZBBXA8MT70 800 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 PPFIA4O75335 1185 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 GGPS1O95749 300 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 F2P00734 622 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 ACTN1P12814 892 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 HOXD8P13378 290 aaPredicted RBP18.83■□□□□ 0.61
NPM1-201ENST00000296930 PSEN2P49810 448 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 GNPTABQ3T906 1256 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 GDF6Q6KF10 455 aaPredicted RBP18.83■□□□□ 0.61
NPM1-201ENST00000296930 C7orf31Q8N865 590 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 CUL5Q93034 780 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 SPATA33Q96N06 139 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.61
NPM1-201ENST00000296930 TM6SF1Q9BZW5 370 aa18.83■□□□□ 0.61
NPM1-201ENST00000296930 PRUNE2Q8WUY3 3088 aa18.83■□□□□ 0.6
NPM1-201ENST00000296930 CD2BP2O95400 341 aaKnown RBP18.83■□□□□ 0.6
NPM1-201ENST00000296930 UBA1P22314 1058 aaKnown RBP18.83■□□□□ 0.6
NPM1-201ENST00000296930 COL9A3Q14050 684 aaPredicted RBP18.83■□□□□ 0.6
NPM1-201ENST00000296930 MFSD10Q14728 455 aa18.83■□□□□ 0.6
NPM1-201ENST00000296930 SRBD1Q8N5C6 995 aaKnown RBP18.83■□□□□ 0.6
NPM1-201ENST00000296930 JAKMIP1Q96N16 626 aaKnown RBP18.83■□□□□ 0.6
NPM1-201ENST00000296930 GTF2IRD1Q9UHL9 959 aa18.83■□□□□ 0.6
NPM1-201ENST00000296930 SLC12A7Q9Y666 1083 aa18.83■□□□□ 0.6
NPM1-201ENST00000296930 TET1Q8NFU7 2136 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 HAS3O00219 553 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 PLEKHA8P1O95397 391 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 ZNF286BP0CG31 522 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 SP2Q02086 613 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 KRT32Q14532 448 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 KIAA0753Q2KHM9 967 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 HSDL1Q3SXM5 330 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 SMARCC2Q8TAQ2 1214 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 AFAP1L1Q8TED9 768 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 IPO9Q96P70 1041 aaKnown RBP18.82■□□□□ 0.6
NPM1-201ENST00000296930 CTAGE1Q96RT6 745 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 ALG1Q9BT22 464 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 MLXIPQ9HAP2 919 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 HDAC6Q9UBN7 1215 aa18.82■□□□□ 0.6
NPM1-201ENST00000296930 PIK3CDO00329 1044 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 NEK4P51957 841 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 MRPS9P82933 396 aaKnown RBP18.81■□□□□ 0.6
NPM1-201ENST00000296930 SNX21Q969T3 373 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 ZFP91Q96JP5 570 aaPredicted RBP18.81■□□□□ 0.6
NPM1-201ENST00000296930 INPP4AQ96PE3 977 aaPredicted RBP18.81■□□□□ 0.6
NPM1-201ENST00000296930 FTOQ9C0B1 505 aaKnown RBP eCLIP18.81■□□□□ 0.6
NPM1-201ENST00000296930 SLC28A3Q9HAS3 691 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 ZSWIM6Q9HCJ5 1215 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 SORBS3O60504 671 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 ATP2A2P16615 1042 aaKnown RBP18.81■□□□□ 0.6
NPM1-201ENST00000296930 RXRAP19793 462 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 ICAM3P32942 547 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 SGMS1Q86VZ5 419 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 GPKOWQ92917 476 aaPredicted RBP eCLIP18.81■□□□□ 0.63e-13■□□□□ 10
NPM1-201ENST00000296930 GAS2L1Q99501 681 aaPredicted RBP18.81■□□□□ 0.6
NPM1-201ENST00000296930 LRRC2Q9BYS8 371 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 NKX2-4Q9H2Z4 354 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 PCDHA11Q9Y5I1 949 aa18.81■□□□□ 0.6
NPM1-201ENST00000296930 PARNO95453 639 aaKnown RBP18.8■□□□□ 0.6
NPM1-201ENST00000296930 CPA1P15085 419 aa18.8■□□□□ 0.6
NPM1-201ENST00000296930 RBL2Q08999 1139 aa18.8■□□□□ 0.6
NPM1-201ENST00000296930 XRRA1Q6P2D8 792 aa18.8■□□□□ 0.6
NPM1-201ENST00000296930 USP17L6PQ6QN14 398 aa18.8■□□□□ 0.6
NPM1-201ENST00000296930 FANCBQ8NB91 859 aa18.8■□□□□ 0.6
NPM1-201ENST00000296930 YBX2Q9Y2T7 364 aaKnown RBP18.8■□□□□ 0.6
NPM1-201ENST00000296930 SPATA31C2B4DYI2 1134 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 MEIS2O14770 477 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 FIBPO43427 364 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 SELPP16109 830 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 PSMA5P28066 241 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 PTK7Q13308 1070 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms