RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TCERG1LQ5VWI1 586 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 MYOCDQ8IZQ8 938 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 ZNF804BA4D1E1 1349 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 SLC35G1Q2M3R5 365 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 ZSCAN29Q8IWY8 852 aaPredicted RBP16.2■□□□□ 0.18
CCNF-201ENST00000293968 CCDC114Q96M63 670 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 MYCBPQ99417 103 aaPredicted RBP16.2■□□□□ 0.18
CCNF-201ENST00000293968 FLT1P17948 1338 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 PRPF4BQ13523 1007 aaKnown RBP16.19■□□□□ 0.18
CCNF-201ENST00000293968 RPS6KA1Q15418 735 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 UNC13DQ70J99 1090 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 GCOM1H8Y6P7 765 aaPredicted RBP16.19■□□□□ 0.18
CCNF-201ENST00000293968 FGRP09769 529 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 MYZAPP0CAP1 466 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 HDLBPQ00341 1268 aaKnown RBP16.19■□□□□ 0.18
CCNF-201ENST00000293968 ASIC2Q16515 512 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 FIGNQ5HY92 759 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 NAA35Q5VZE5 725 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 CENPPQ6IPU0 288 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 GALNT17Q6IS24 598 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 CEP57Q86XR8 500 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 SH3GL2Q99962 352 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 COL18A1P39060 1754 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 RAD51CO43502 376 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 CTNNA1P35221 906 aaKnown RBP16.19■□□□□ 0.18
CCNF-201ENST00000293968 PRPHP41219 470 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 CCDC121Q6ZUS5 278 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 TXNRD3Q86VQ6 643 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 GPR101Q96P66 508 aaPredicted RBP16.19■□□□□ 0.18
CCNF-201ENST00000293968 EYA3Q99504 573 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 COL1A1P02452 1464 aaPredicted RBP16.19■□□□□ 0.18
CCNF-201ENST00000293968 MEFVO15553 781 aaPredicted RBP16.19■□□□□ 0.18
CCNF-201ENST00000293968 GRB10Q13322 594 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 ZNF473Q8WTR7 871 aaKnown RBP16.19■□□□□ 0.18
CCNF-201ENST00000293968 IQCDQ96DY2 449 aa16.19■□□□□ 0.18
CCNF-201ENST00000293968 DISP2A7MBM2 1401 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 PRLRP16471 622 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 MAP2K2P36507 400 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 IFFO1Q0D2I5 559 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 SF3B2Q13435 895 aaKnown RBP16.18■□□□□ 0.18
CCNF-201ENST00000293968 C12orf60Q5U649 245 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 CABS1Q96KC9 395 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 CCT8L2Q96SF2 557 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 COL4A3BPQ9Y5P4 624 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 BCL9LQ86UU0 1499 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 BAZ2AQ9UIF9 1905 aaKnown RBP16.18■□□□□ 0.18
CCNF-201ENST00000293968 PPP1R37O75864 691 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 BAG3O95817 575 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 ITPK1Q13572 414 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 HERC4Q5GLZ8 1057 aaPredicted RBP16.18■□□□□ 0.18
CCNF-201ENST00000293968 SPTY2D1Q68D10 685 aaPredicted RBP16.18■□□□□ 0.18
CCNF-201ENST00000293968 NLRP14Q86W24 1093 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 SMIM23A6NLE4 172 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 CAVIN3Q969G5 261 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 ATP6V1G3Q96LB4 118 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 MMTAG2Q9BU76 263 aaKnown RBP16.18■□□□□ 0.18
CCNF-201ENST00000293968 EPN3Q9H201 632 aa16.18■□□□□ 0.18
CCNF-201ENST00000293968 DDX60Q8IY21 1712 aaKnown RBP16.18■□□□□ 0.18
CCNF-201ENST00000293968 SERPING1P05155 500 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 NBPF5PQ86XG9 351 aaPredicted RBP16.17■□□□□ 0.18
CCNF-201ENST00000293968 NLRP3Q96P20 1036 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 DPH5Q9H2P9 285 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 A0A087X0T9 212 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 FAM228BP0C875 321 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 GLE1Q53GS7 698 aaKnown RBP16.17■□□□□ 0.18
CCNF-201ENST00000293968 DCAF17Q5H9S7 520 aaPredicted RBP16.17■□□□□ 0.18
CCNF-201ENST00000293968 ADAT2Q7Z6V5 191 aaKnown RBP16.17■□□□□ 0.18
CCNF-201ENST00000293968 BAP1Q92560 729 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 CHD4Q14839 1912 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 SLC37A4O43826 429 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 CPP00450 1065 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 UBE2SQ16763 222 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 FAM26FQ5R3K3 315 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 GUF1Q8N442 669 aaKnown RBP16.17■□□□□ 0.18
CCNF-201ENST00000293968 BCL9O00512 1426 aa16.17■□□□□ 0.18
CCNF-201ENST00000293968 A6NNZ2 444 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 TMOD1P28289 359 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 FKBP3Q00688 224 aaKnown RBP16.16■□□□□ 0.18
CCNF-201ENST00000293968 TUBB8Q3ZCM7 444 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 SCLT1Q96NL6 688 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 DDX47Q9H0S4 455 aaKnown RBP16.16■□□□□ 0.18
CCNF-201ENST00000293968 BLOC1S4Q9NUP1 217 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 MDH1P40925 334 aaKnown RBP16.16■□□□□ 0.18
CCNF-201ENST00000293968 LRRC63Q05C16 580 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 KCNK18Q7Z418 384 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
CCNF-201ENST00000293968 RNF10Q8N5U6 811 aaKnown RBP16.16■□□□□ 0.18
CCNF-201ENST00000293968 NCAPGQ9BPX3 1015 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 CD248Q9HCU0 757 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 SEPT11Q9NVA2 429 aaKnown RBP16.16■□□□□ 0.18
CCNF-201ENST00000293968 DUOX1Q9NRD9 1551 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 NPHP3-ACAD11A0A0J9YXS1 232 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 ACTN1P12814 892 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 ITIH3Q06033 890 aa16.16■□□□□ 0.18
CCNF-201ENST00000293968 PTGISQ16647 500 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms