RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 KIAA0753Q2KHM9 967 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 MYSM1Q5VVJ2 828 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 VSIG10LQ86VR7 867 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 SESTD1Q86VW0 696 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 FCHSD1Q86WN1 690 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 RAB11FIP4Q86YS3 637 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 RETREG2Q8NC44 543 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 GDPD5Q8WTR4 605 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 IWS1Q96ST2 819 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 C16orf70Q9BSU1 422 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 SEZ6LQ9BYH1 1024 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 RIOX1Q9H6W3 641 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 GTF2IRD1Q9UHL9 959 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 PCDHA1Q9Y5I3 950 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 E7EWF7 191 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 ZBTB5O15062 677 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 KPNA6O60684 536 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 GGPS1O95749 300 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 F2P00734 622 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 CXCL10P02778 98 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 HOXD8P13378 290 aaPredicted RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 UBA1P22314 1058 aaKnown RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 MRPS5P82675 430 aaKnown RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 PTPN11Q06124 597 aaPredicted RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 TROAPQ12815 778 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 CELF3Q5SZQ8 465 aaKnown RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 LRRC8DQ7L1W4 858 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 DHX37Q8IY37 1157 aaKnown RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 CMTR1Q8N1G2 835 aaKnown RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 IGDCC4Q8TDY8 1250 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 UBAC1Q9BSL1 405 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 AMNQ9BXJ7 453 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 KRT23Q9C075 422 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 MTIF3Q9H2K0 278 aaKnown RBP10.25□□□□□ -0.77
TFF1-201ENST00000291527 RTEL1Q9NZ71 1219 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 MTUS1Q9ULD2 1270 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 NOD1Q9Y239 953 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 NLRC5Q86WI3 1866 aa10.25□□□□□ -0.77
TFF1-201ENST00000291527 hCG_1642624A0A1W2PR95 340 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 IFIT3O14879 490 aaKnown RBP10.24□□□□□ -0.77
TFF1-201ENST00000291527 TREHO43280 583 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 PFKMP08237 780 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 SELPP16109 830 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 RXRAP19793 462 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 CASTP20810 708 aaKnown RBP10.24□□□□□ -0.77
TFF1-201ENST00000291527 RFC2P35250 354 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 MKRN4PQ13434 485 aaPredicted RBP10.24□□□□□ -0.77
TFF1-201ENST00000291527 BFSP2Q13515 415 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 DGKDQ16760 1214 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 TRIM50Q86XT4 487 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 MCF2L2Q86YR7 1114 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 PPTC7Q8NI37 304 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 EMID1Q96A84 441 aaPredicted RBP10.24□□□□□ -0.77
TFF1-201ENST00000291527 ZBTB10Q96DT7 871 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 SPATA33Q96N06 139 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 UHRF1Q96T88 793 aaPredicted RBP10.24□□□□□ -0.77
TFF1-201ENST00000291527 CD320Q9NPF0 282 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 PPP4R2Q9NY27 417 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 CTNNA3Q9UI47 895 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 RAD50Q92878 1312 aa10.24□□□□□ -0.77
TFF1-201ENST00000291527 HIP1O00291 1037 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 TLL1O43897 1013 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 LGR5O75473 907 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 PLEKHA8P1O95397 391 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 POU3F3P20264 500 aaPredicted RBP10.23□□□□□ -0.77
TFF1-201ENST00000291527 COL9A1P20849 921 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 RBL2Q08999 1139 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 LAMC2Q13753 1193 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 SKIV2LQ15477 1246 aaKnown RBP10.23□□□□□ -0.77
TFF1-201ENST00000291527 BRDTQ58F21 947 aaPredicted RBP10.23□□□□□ -0.77
TFF1-201ENST00000291527 CCDC178Q5BJE1 867 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 USP17L6PQ6QN14 398 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 MB21D2Q8IYB1 491 aaPredicted RBP10.23□□□□□ -0.77
TFF1-201ENST00000291527 C7orf31Q8N865 590 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 PHOSPHO2Q8TCD6 241 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 AFAP1L1Q8TED9 768 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 SYMPKQ92797 1274 aaKnown RBP10.23□□□□□ -0.77
TFF1-201ENST00000291527 SLC9A7Q96T83 725 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 C17orf80Q9BSJ5 609 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 LRRC2Q9BYS8 371 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 CNNM2Q9H8M5 875 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 PNMA2Q9UL42 364 aa10.23□□□□□ -0.77
TFF1-201ENST00000291527 LINC01553A4QN01 128 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 SGSM2O43147 1006 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 ATP9AO75110 1047 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 ACTN1P12814 892 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 HOXC8P31273 242 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 PTK7Q13308 1070 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 CNKSR3Q6P9H4 555 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 CYFIP1Q7L576 1253 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 SRBD1Q8N5C6 995 aaKnown RBP10.22□□□□□ -0.77
TFF1-201ENST00000291527 DBF4BQ8NFT6 615 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 CAGE1Q8TC20 777 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 MPHOSPH6Q99547 160 aaKnown RBP10.22□□□□□ -0.77
TFF1-201ENST00000291527 RNPEPQ9H4A4 650 aa10.22□□□□□ -0.77
TFF1-201ENST00000291527 EPHX3Q9H6B9 360 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms