RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 XRRA1Q6P2D8 792 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 NEK8Q86SG6 692 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 NOSTRINQ8IVI9 506 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CRYGNQ8WXF5 182 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 MXRA8Q9BRK3 442 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 FOXP1Q9H334 677 aaPredicted RBP17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CCNT1O60563 726 aaKnown RBP17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 GJB1P08034 283 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 C6orf222P0C671 652 aaPredicted RBP17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SEMA3FQ13275 785 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DUSP28Q4G0W2 176 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 FOXD4L5Q5VV16 416 aaPredicted RBP17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 LHX8Q68G74 356 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 OR6J1Q8NGC5 347 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 FOXD4L4Q8WXT5 416 aaPredicted RBP17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 GPRASP2Q96D09 838 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 JADE2Q9NQC1 790 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 KIAA0100Q14667 2235 aaKnown RBP17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 RBM47A0AV96 593 aaKnown RBP17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 MYADML2A6NDP7 307 aa17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 GGPS1O95749 300 aa17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 TFRCP02786 760 aaKnown RBP17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CYP3A4P08684 503 aa17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 ARP10275 920 aa17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SP2Q02086 613 aa17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 IQSEC1Q6DN90 963 aa17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 KCNH7Q9NS40 1196 aa17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DDX41Q9UJV9 622 aaKnown RBP17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 GNEQ9Y223 722 aaKnown RBP17.69■□□□□ 0.42
ATP6V1C2-201ENST00000272238 IGLV3-22A0A075B6J6 115 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DDX39AO00148 427 aaKnown RBP17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 WNT7AO00755 349 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 STX6O43752 255 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SLC37A4O43826 429 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 EDIL3O43854 480 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DUSP11O75319 330 aaKnown RBP17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SGPL1O95470 568 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 BEX3Q00994 111 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SETQ01105 290 aaPredicted RBP17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 NBR1Q14596 966 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CCDC62Q6P9F0 684 aa17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DDX25Q9UHL0 483 aaKnown RBP17.68■□□□□ 0.42
ATP6V1C2-201ENST00000272238 ATP9AO75110 1047 aa17.67■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CAPN15O75808 1086 aa17.67■□□□□ 0.42
ATP6V1C2-201ENST00000272238 GJA8P48165 433 aa17.67■□□□□ 0.42
ATP6V1C2-201ENST00000272238 USP11P51784 963 aa17.67■□□□□ 0.42
ATP6V1C2-201ENST00000272238 GJA10Q969M2 543 aa17.67■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CDHR1Q96JP9 859 aa17.67■□□□□ 0.42
ATP6V1C2-201ENST00000272238 AP5M1Q9H0R1 490 aa17.67■□□□□ 0.42
ATP6V1C2-201ENST00000272238 BCAS3Q9H6U6 928 aa17.67■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SPATA31C2B4DYI2 1134 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 ADAMTS4O75173 837 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 GH1P01241 217 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 EN2P19622 333 aaPredicted RBP17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 ICAM3P32942 547 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 ARHGAP1Q07960 439 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 KCNV1Q6PIU1 500 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CYFIP1Q7L576 1253 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DHX37Q8IY37 1157 aaKnown RBP17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 LENG9Q96B70 501 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 ZNF577Q9BSK1 485 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 MLXIPQ9HAP2 919 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SPC25Q9HBM1 224 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 NOL7Q9UMY1 257 aaKnown RBP17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 MEIS1O00470 390 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 NKRFO15226 690 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 KCNA2P16389 499 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CIITAP33076 1130 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 MCM7P33993 719 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 PKP1Q13835 747 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 IPO9Q96P70 1041 aaKnown RBP17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 AGO4Q9HCK5 861 aaKnown RBP17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 MTMR6Q9Y217 621 aa17.66■□□□□ 0.42
ATP6V1C2-201ENST00000272238 ITGB3BPQ13352 177 aaPredicted RBP17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 LRRC41Q15345 812 aa17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 FSCN1Q16658 493 aaKnown RBP17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 TTC38Q5R3I4 469 aa17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 RNF180Q86T96 592 aa17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 DIS3LQ8TF46 1054 aaKnown RBP17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SPATA33Q96N06 139 aa17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CRISPLD2Q9H0B8 497 aa17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 OGDHLQ9ULD0 1010 aa17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 TELO2Q9Y4R8 837 aa17.65■□□□□ 0.42
ATP6V1C2-201ENST00000272238 KBTBD13C9JR72 458 aa17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 IPO5O00410 1097 aaKnown RBP17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 NOP56O00567 594 aaKnown RBP17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 MSH4O15457 936 aa17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 FARP2O94887 1054 aaPredicted RBP17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 TGFB3P10600 412 aa17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 GJA9P57773 515 aa17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 NEDD9Q14511 834 aa17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 GNASQ5JWF2 1037 aa17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 CELF3Q5SZQ8 465 aaKnown RBP17.64■□□□□ 0.41
ATP6V1C2-201ENST00000272238 NIPA1Q7RTP0 329 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms