RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
CDH11-201ENST00000268603 ANKRD44Q8N8A2 993 aa13.63□□□□□ -0.23
CDH11-201ENST00000268603 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
CDH11-201ENST00000268603 MYCBPQ99417 103 aaPredicted RBP13.63□□□□□ -0.23
CDH11-201ENST00000268603 RGL1Q9NZL6 768 aa13.63□□□□□ -0.23
CDH11-201ENST00000268603 PCDHA1Q9Y5I3 950 aa13.63□□□□□ -0.23
CDH11-201ENST00000268603 PASKQ96RG2 1323 aa13.63□□□□□ -0.23
CDH11-201ENST00000268603 KRT87PA6NCN2 255 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 DDAH1O94760 285 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 CCDC159P0C7I6 412 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 SKIP12755 728 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 LIG3P49916 1009 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 IDI1Q13907 227 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 TRIM42Q8IWZ5 723 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 THEM5Q8N1Q8 247 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 TEX9Q8N6V9 391 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 LPIN2Q92539 896 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 HEXIM2Q96MH2 286 aaKnown RBP13.62□□□□□ -0.23
CDH11-201ENST00000268603 PACSIN2Q9UNF0 486 aaPredicted RBP13.62□□□□□ -0.23
CDH11-201ENST00000268603 WDR17Q8IZU2 1322 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 MSH2P43246 934 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 SELENONQ9NZV5 590 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
CDH11-201ENST00000268603 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
CDH11-201ENST00000268603 KRT1P04264 644 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 AOC3Q16853 763 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 C16orf87Q6PH81 154 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 SCARA5Q6ZMJ2 495 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 RINLQ6ZS11 566 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
CDH11-201ENST00000268603 TSC1Q92574 1164 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 KMT5AQ9NQR1 393 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 SYCE1LA8MT33 242 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 C16orf72Q14CZ0 275 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 TMED2Q15363 201 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 ARL13BQ3SXY8 428 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 USP26Q9BXU7 913 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 SENP1Q9P0U3 644 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 BIVM-ERCC5R4GMW8 1640 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
CDH11-201ENST00000268603 SERPIND1P05546 499 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 ABCB5Q2M3G0 1257 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 NBPF20Q3BBV1 942 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
CDH11-201ENST00000268603 NAF1Q96HR8 494 aaKnown RBP13.62□□□□□ -0.23
CDH11-201ENST00000268603 TBC1D32Q96NH3 1257 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 KIFC3Q9BVG8 833 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 MED4Q9NPJ6 270 aa13.62□□□□□ -0.23
CDH11-201ENST00000268603 EIF3CLB5ME19 914 aaKnown RBP13.61□□□□□ -0.23
CDH11-201ENST00000268603 BCAMP50895 628 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 DDX42Q86XP3 938 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH11-201ENST00000268603 GJA10Q969M2 543 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 EIF3CQ99613 913 aaKnown RBP13.61□□□□□ -0.23
CDH11-201ENST00000268603 IL16Q14005 1332 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 SLC27A2O14975 620 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 MED7O43513 233 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 ARIH2O95376 493 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 TCF3P15923 654 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 CCND2P30279 289 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 MAPK4P31152 587 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 CENPAP49450 140 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 PNOCQ13519 176 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 RRM2BQ7LG56 351 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 SCN4BQ8IWT1 228 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 CAPS2Q9BXY5 557 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 TRIM15Q9C019 465 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 CASS4Q9NQ75 786 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 ADD3Q9UEY8 706 aaKnown RBP13.61□□□□□ -0.23
CDH11-201ENST00000268603 PLBD2Q8NHP8 589 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 AFG1LQ8WV93 481 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 NT5C1BQ96P26 610 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 JPH2Q9BR39 696 aaPredicted RBP13.61□□□□□ -0.23
CDH11-201ENST00000268603 ARPP21Q9UBL0 812 aaPredicted RBP13.61□□□□□ -0.23
CDH11-201ENST00000268603 MYO1FO00160 1098 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 IL9RQ01113 521 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 CHMP1BQ7LBR1 199 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 ZNF577Q9BSK1 485 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 KCNJ18B7U540 433 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 ADKP55263 362 aaKnown RBP13.61□□□□□ -0.23
CDH11-201ENST00000268603 KCNJ12Q14500 433 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 CDO1Q16878 200 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 ADALQ6DHV7 355 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 SAR1BQ9Y6B6 198 aa13.61□□□□□ -0.23
CDH11-201ENST00000268603 CD58P19256 250 aa13.6□□□□□ -0.23
CDH11-201ENST00000268603 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
CDH11-201ENST00000268603 ANKS3Q6ZW76 656 aa13.6□□□□□ -0.23
CDH11-201ENST00000268603 ARMCX2Q7L311 632 aa13.6□□□□□ -0.23
CDH11-201ENST00000268603 DDX53Q86TM3 631 aaKnown RBP13.6□□□□□ -0.23
CDH11-201ENST00000268603 DHX38Q92620 1227 aaKnown RBP13.6□□□□□ -0.23
CDH11-201ENST00000268603 PHF21AQ96BD5 680 aa13.6□□□□□ -0.23
CDH11-201ENST00000268603 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
CDH11-201ENST00000268603 C6orf203Q9P0P8 240 aaPredicted RBP13.6□□□□□ -0.23
CDH11-201ENST00000268603 OCA2Q04671 838 aa13.6□□□□□ -0.23
CDH11-201ENST00000268603 ZSCAN26Q16670 478 aa13.6□□□□□ -0.23
CDH11-201ENST00000268603 SUPT20HL1Q3ZLR7 823 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms