RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 EFCAB13Q8IY85 973 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 MYCBPQ99417 103 aaPredicted RBP15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 SLC24A3Q9HC58 644 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 PCDHA13Q9Y5I0 950 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 GCOM1H8Y6P7 765 aaPredicted RBP15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 STXBP3O00186 592 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 FGFR1OPO95684 399 aaKnown RBP15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 MYZAPP0CAP1 466 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 SLC9C1Q4G0N8 1177 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 CEP95Q96GE4 821 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 NDST4Q9H3R1 872 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 THAP9Q9H5L6 903 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 ADAMTS7Q9UKP4 1686 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 UFL1O94874 794 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 SRGNP10124 158 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 SF3B2Q13435 895 aaKnown RBP15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 B4GALNT4Q76KP1 1039 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 HPCAL4Q9UM19 191 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 MYMKA6NI61 221 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 IRAK1P51617 712 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 SNAP25P60880 206 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 ANKRD42Q8N9B4 389 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 MTA3Q9BTC8 594 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 SEMA6BQ9H3T3 888 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 BARHL2Q9NY43 387 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 NPHP3-ACAD11A0A0J9YXS1 232 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 NEBLO76041 1014 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 ARHGAP44Q17R89 818 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 RAB34Q9BZG1 259 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 MYO1AQ9UBC5 1043 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 ATP8A1Q9Y2Q0 1164 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 COL18A1P39060 1754 aa15.41■□□□□ 0.06
TUBGCP3-201ENST00000261965 ZNF263O14978 683 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 EZRP15311 586 aaKnown RBP15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 GNA11P29992 359 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 CDK8P49336 464 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 PAK2Q13177 524 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 RPS6KA1Q15418 735 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 MEX3CQ5U5Q3 659 aaKnown RBP15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 CNNM4Q6P4Q7 775 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 CAPN12Q6ZSI9 719 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 KIAA0895Q8NCT3 520 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 FAM184BQ9ULE4 1060 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 SPEF2Q9C093 1822 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 FAM196BA6NMK8 535 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 RHOBTB3O94955 611 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 KIF4AO95239 1232 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 SLC1A4P43007 532 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 CARSP49589 748 aaKnown RBP15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 TNNC1P63316 161 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 CYP4A11Q02928 519 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 TUBB2AQ13885 445 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 VPS36Q86VN1 386 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 HNRNPLLQ8WVV9 542 aaKnown RBP15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 TUBB2BQ9BVA1 445 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 UBXN6Q9BZV1 441 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 ARHGAP20Q9P2F6 1191 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 PDS5AQ29RF7 1337 aaKnown RBP15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 ZKSCAN8Q15776 578 aaPredicted RBP15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 SPATA4Q8NEY3 305 aa15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 DHTKD1Q96HY7 919 aaPredicted RBP15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 NOVA2Q9UNW9 492 aaKnown RBP15.4■□□□□ 0.06
TUBGCP3-201ENST00000261965 SLC37A4O43826 429 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 PPP1R12BO60237 982 aaPredicted RBP15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 TMOD1P28289 359 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 GRM4Q14833 912 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 FAM133BQ5BKY9 247 aaKnown RBP15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 DGKHQ86XP1 1220 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 ZNF507Q8TCN5 953 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 DNAJC7Q99615 494 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 SERPINA10Q9UK55 444 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 ZBTB21Q9ULJ3 1066 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 GLI3P10071 1580 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 PSMD14O00487 310 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 KRIT1O00522 736 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 SFMBT2Q5VUG0 894 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 KCTD1Q719H9 257 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 KRT25Q7Z3Z0 450 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 LARP4BQ92615 738 aaKnown RBP15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 CD248Q9HCU0 757 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 KBTBD4Q9NVX7 518 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 NR1D1P20393 614 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 RFC4P35249 363 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 MFSD14BQ5SR56 506 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 MMS22LQ6ZRQ5 1243 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 PEX26Q7Z412 305 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 DDX12PQ92771 950 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 C8orf37Q96NL8 207 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 DDX47Q9H0S4 455 aaKnown RBP15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.39■□□□□ 0.05
TUBGCP3-201ENST00000261965 MYH7P12883 1935 aa15.38■□□□□ 0.05
TUBGCP3-201ENST00000261965 MEIS1O00470 390 aa15.38■□□□□ 0.05
TUBGCP3-201ENST00000261965 RASA1P20936 1047 aa15.38■□□□□ 0.05
TUBGCP3-201ENST00000261965 SCNN1DP51172 638 aa15.38■□□□□ 0.05
TUBGCP3-201ENST00000261965 VWA3BQ502W6 1294 aa15.38■□□□□ 0.05
TUBGCP3-201ENST00000261965 TTBK2Q6IQ55 1244 aa15.38■□□□□ 0.05
TUBGCP3-201ENST00000261965 KCNK18Q7Z418 384 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms