RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PXMP2Q9NR77 195 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 NRBP1Q9UHY1 535 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 LOC102724159A0A0B4J2E5 919 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
PFDN1-201ENST00000261813 ADCY7P51828 1080 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 PWP2Q15269 919 aaKnown RBP13.25□□□□□ -0.29
PFDN1-201ENST00000261813 FAM184AQ8NB25 1140 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 NSUN6Q8TEA1 469 aaKnown RBP13.25□□□□□ -0.29
PFDN1-201ENST00000261813 CCDC12Q8WUD4 166 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-201ENST00000261813 WASF1Q92558 559 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 PDCD2LQ9BRP1 358 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 RNF208Q9H0X6 261 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 HMX1Q9NP08 348 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-201ENST00000261813 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-201ENST00000261813 SH3GLB2Q9NR46 395 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 CHMP5Q9NZZ3 219 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 CNPY2Q9Y2B0 182 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 FRMPD4Q14CM0 1322 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 BRCA2P51587 3418 aa13.25□□□□□ -0.29
PFDN1-201ENST00000261813 MLLT3P42568 568 aaPredicted RBP13.24□□□□□ -0.29
PFDN1-201ENST00000261813 MRPL12P52815 198 aaKnown RBP13.24□□□□□ -0.29
PFDN1-201ENST00000261813 ACVR2BQ13705 512 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 ARHGEF16Q5VV41 709 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 EEPD1Q7L9B9 569 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 FBXO16Q8IX29 292 aaPredicted RBP13.24□□□□□ -0.29
PFDN1-201ENST00000261813 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 IL31RAQ8NI17 732 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 ABHD16BQ9H3Z7 469 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 GJB4Q9NTQ9 266 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 ZHX1Q9UKY1 873 aaPredicted RBP13.24□□□□□ -0.29
PFDN1-201ENST00000261813 MCM3APO60318 1980 aa13.24□□□□□ -0.29
PFDN1-201ENST00000261813 NR3C2P08235 984 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 CNGA1P29973 690 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 NLRP5P59047 1200 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 PDE4DQ08499 809 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 PGM5Q15124 567 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 NPY5RQ15761 445 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 PGBD1Q96JS3 809 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 DEFB118Q96PH6 123 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 IWS1Q96ST2 819 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 ALG1Q9BT22 464 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 PDGFCQ9NRA1 345 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 PCDHA6Q9UN73 950 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 KCNJ14Q9UNX9 436 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 PCDHA8Q9Y5H6 950 aa13.23□□□□□ -0.29
PFDN1-201ENST00000261813 SEPT4O43236 478 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 MAP3K7O43318 606 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 GJB1P08034 283 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 GJB2P29033 226 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 GNA11P29992 359 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 TSR1Q2NL82 804 aaKnown RBP13.22□□□□□ -0.29
PFDN1-201ENST00000261813 JAKMIP3Q5VZ66 844 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 TAPT1Q6NXT6 567 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 TEX2Q8IWB9 1127 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 RASGRP4Q8TDF6 673 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 MPHOSPH6Q99547 160 aaKnown RBP13.22□□□□□ -0.29
PFDN1-201ENST00000261813 PHF20Q9BVI0 1012 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 ANO3Q9BYT9 981 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 GLT8D2Q9H1C3 349 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 VTA1Q9NP79 307 aa13.22□□□□□ -0.29
PFDN1-201ENST00000261813 DDX20Q9UHI6 824 aaKnown RBP13.22□□□□□ -0.29
PFDN1-201ENST00000261813 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.21□□□□□ -0.29
PFDN1-201ENST00000261813 SPDYE3A6NKU9 549 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 B4DLN1 442 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 M0R2N6 131 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 ADCY6O43306 1168 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 MYCLP12524 364 aaPredicted RBP13.21□□□□□ -0.29
PFDN1-201ENST00000261813 XBP1P17861 261 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 DDIT3P35638 169 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 ADCYAP1R1P41586 468 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 MRPS9P82933 396 aaKnown RBP13.21□□□□□ -0.29
PFDN1-201ENST00000261813 AP3B2Q13367 1082 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 STXBP2Q15833 593 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 CCDC144BQ3MJ40 725 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 TMEM63BQ5T3F8 832 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 VSIG10LQ86VR7 867 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 FAM177A1Q8N128 213 aaPredicted RBP13.21□□□□□ -0.29
PFDN1-201ENST00000261813 REXO1Q8N1G1 1221 aaKnown RBP13.21□□□□□ -0.29
PFDN1-201ENST00000261813 DAGLBQ8NCG7 672 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
PFDN1-201ENST00000261813 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
PFDN1-201ENST00000261813 PCDHA4Q9UN74 947 aa13.21□□□□□ -0.29
PFDN1-201ENST00000261813 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.3
PFDN1-201ENST00000261813 RBM47A0AV96 593 aaKnown RBP13.2□□□□□ -0.3
PFDN1-201ENST00000261813 BHMG1C9JSJ3 638 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-201ENST00000261813 EIF3JO75822 258 aaKnown RBP13.2□□□□□ -0.3
PFDN1-201ENST00000261813 RGS20O76081 388 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 SGPL1O95470 568 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 FOSP01100 380 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-201ENST00000261813 AKR1A1P14550 325 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 CCND2P30279 289 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 GJA8P48165 433 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
PFDN1-201ENST00000261813 PCNX4Q63HM2 1172 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 LARP1BQ659C4 914 aaKnown RBP13.2□□□□□ -0.3
PFDN1-201ENST00000261813 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms