RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TBC1D7Q9P0N9 293 aa12.02□□□□□ -0.48
COPA-201ENST00000241704 SRPRBQ9Y5M8 271 aaKnown RBP12.02□□□□□ -0.48
COPA-201ENST00000241704 SORBS3O60504 671 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 BMP3P12645 472 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 PDCLQ13371 301 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 PARP9Q8IXQ6 854 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 JAKMIP2Q96AA8 810 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 CRAMP1Q96RY5 1269 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 HAUS4Q9H6D7 363 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 CD248Q9HCU0 757 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 MYO5BQ9ULV0 1848 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 MYO1FO00160 1098 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 GPBP1Q86WP2 473 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 NELFCDQ8IXH7 590 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.49
COPA-201ENST00000241704 SPDL1Q96EA4 605 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 PNKPQ96T60 521 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 AP5M1Q9H0R1 490 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 TDRD3Q9H7E2 651 aaKnown RBP12.02□□□□□ -0.49
COPA-201ENST00000241704 MRPL44Q9H9J2 332 aaKnown RBP12.02□□□□□ -0.49
COPA-201ENST00000241704 PNMA3Q9UL41 463 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 RPN1P04843 607 aaKnown RBP12.02□□□□□ -0.49
COPA-201ENST00000241704 CRKP46108 304 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 SPATA1Q5VX52 437 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 LMNTD2Q8IXW0 634 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 TBCKQ8TEA7 893 aa12.02□□□□□ -0.49
COPA-201ENST00000241704 SLC16A2P36021 539 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
COPA-201ENST00000241704 ALS2CLQ60I27 953 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 KCTD16Q68DU8 428 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 CALR3Q96L12 384 aaKnown RBP12.01□□□□□ -0.49
COPA-201ENST00000241704 TSGA10Q9BZW7 698 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 PCDHB6Q9Y5E3 794 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 LUC7L3O95232 432 aaKnown RBP12.01□□□□□ -0.49
COPA-201ENST00000241704 GCNT3O95395 438 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 EEF2P13639 858 aaKnown RBP12.01□□□□□ -0.49
COPA-201ENST00000241704 GJC1P36383 396 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 PAK2Q13177 524 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 MYOCDQ8IZQ8 938 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 MSL3Q8N5Y2 521 aaKnown RBP12.01□□□□□ -0.49
COPA-201ENST00000241704 DEPTORQ8TB45 409 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 MIEF2Q96C03 454 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 LRRC45Q96CN5 670 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 GJB4Q9NTQ9 266 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 ERCC5P28715 1186 aaPredicted RBP12.01□□□□□ -0.49
COPA-201ENST00000241704 KRT26Q7Z3Y9 468 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 IRAK4Q9NWZ3 460 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 SAMD15Q9P1V8 674 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 PRKAG2Q9UGJ0 569 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 ORC4O43929 436 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 CHGBP05060 677 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 GSCP56915 257 aaPredicted RBP12.01□□□□□ -0.49
COPA-201ENST00000241704 MORC3Q14149 939 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 SLC16A10Q8TF71 515 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 COA7Q96BR5 231 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 IQCDQ96DY2 449 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 BATF3Q9NR55 127 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 RAB21Q9UL25 225 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 HPCAL4Q9UM19 191 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 ADGRG1Q9Y653 693 aa12.01□□□□□ -0.49
COPA-201ENST00000241704 TMOD1P28289 359 aa12□□□□□ -0.49
COPA-201ENST00000241704 EPHB4P54760 987 aa12□□□□□ -0.49
COPA-201ENST00000241704 SLMAPQ14BN4 828 aa12□□□□□ -0.49
COPA-201ENST00000241704 NBPF20Q3BBV1 942 aa12□□□□□ -0.49
COPA-201ENST00000241704 NBPF9Q3BBW0 867 aa12□□□□□ -0.49
COPA-201ENST00000241704 COL5A2P05997 1499 aaPredicted RBP12□□□□□ -0.49
COPA-201ENST00000241704 KCNJ18B7U540 433 aa12□□□□□ -0.49
COPA-201ENST00000241704 GNA14O95837 355 aa12□□□□□ -0.49
COPA-201ENST00000241704 RBL2Q08999 1139 aa12□□□□□ -0.49
COPA-201ENST00000241704 KCNJ12Q14500 433 aa12□□□□□ -0.49
COPA-201ENST00000241704 KIAA0753Q2KHM9 967 aa12□□□□□ -0.49
COPA-201ENST00000241704 TMEM179Q6ZVK1 233 aa12□□□□□ -0.49
COPA-201ENST00000241704 DPF2Q92785 391 aa12□□□□□ -0.49
COPA-201ENST00000241704 IL25Q9H293 177 aa12□□□□□ -0.49
COPA-201ENST00000241704 SUGT1Q9Y2Z0 365 aa12□□□□□ -0.49
COPA-201ENST00000241704 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
COPA-201ENST00000241704 EXOC3O60645 756 aa12□□□□□ -0.49
COPA-201ENST00000241704 MYZAPP0CAP1 466 aa12□□□□□ -0.49
COPA-201ENST00000241704 CDC27P30260 824 aa12□□□□□ -0.49
COPA-201ENST00000241704 NNTQ13423 1086 aa12□□□□□ -0.49
COPA-201ENST00000241704 DRP2Q13474 957 aa12□□□□□ -0.49
COPA-201ENST00000241704 GKAP1Q5VSY0 366 aaPredicted RBP12□□□□□ -0.49
COPA-201ENST00000241704 RUFY4Q6ZNE9 571 aa12□□□□□ -0.49
COPA-201ENST00000241704 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
COPA-201ENST00000241704 PNMA6FA0A0J9YX94 578 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 XKR9Q5GH70 373 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 ARL6IP4Q66PJ3 421 aaKnown RBP11.99□□□□□ -0.49
COPA-201ENST00000241704 ZBTB8OSQ8IWT0 167 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 ACRBPQ8NEB7 543 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 WRNIP1Q96S55 665 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 CCDC113Q9H0I3 377 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 ANKZF1Q9H8Y5 726 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 PABPN1LA6NDY0 278 aaKnown RBP11.99□□□□□ -0.49
COPA-201ENST00000241704 ENC1O14682 589 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 CASP14P31944 242 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms