RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 MYO1FO00160 1098 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 THAP12O43422 761 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 FYB2Q5VWT5 728 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 GSPT2Q8IYD1 628 aaKnown RBP18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 RNF34Q969K3 372 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 TMEM260Q9NX78 707 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 HDAC6Q9UBN7 1215 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 ATP8B1O43520 1251 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 GCFC2P16383 781 aaKnown RBP18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 PDE6CP51160 858 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 ATP11AP98196 1134 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 MYL7Q01449 175 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 SGMS1Q86VZ5 419 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 PPFIBP2Q8ND30 876 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 MCUR1Q96AQ8 359 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 DAAM1Q9Y4D1 1078 aa18.7■□□□□ 0.58
SLC1A4-201ENST00000234256 PSMC2P35998 433 aaKnown RBP18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 HNRNPH2P55795 449 aaKnown RBP18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 CROCCP2Q86T23 111 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 STAG2Q8N3U4 1231 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 ADAM21Q9UKJ8 722 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 BCS1LQ9Y276 419 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 CA8P35219 290 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 EPHB4P54760 987 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 CTTNQ14247 550 aaKnown RBP18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 NEDD9Q14511 834 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 SUPT20HQ8NEM7 779 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 IVNS1ABPQ9Y6Y0 642 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 FDPSP14324 419 aaKnown RBP18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 IRX3P78415 501 aaPredicted RBP18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 E4F1Q66K89 784 aaPredicted RBP18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 ANKRD35Q8N283 1001 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 ZNF579Q8NAF0 562 aaKnown RBP18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 MLXIPQ9HAP2 919 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 CLTAP09496 248 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 DHX9Q08211 1270 aaKnown RBP18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 ANKRD20A3Q5VUR7 823 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 HPS3Q969F9 1004 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 CEP95Q96GE4 821 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 NFU1Q9UMS0 254 aa18.69■□□□□ 0.58
SLC1A4-201ENST00000234256 LGALS16A8MUM7 142 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 NDC80O14777 642 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 ZKSCAN8Q15776 578 aaPredicted RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 GNPTABQ3T906 1256 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 RRP15Q9Y3B9 282 aaKnown RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 MYL1P05976 194 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 CCDC110Q8TBZ0 833 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 BZW2Q9Y6E2 419 aaKnown RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 E9PMD0 336 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 PGRMC1O00264 195 aaKnown RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 NSFP46459 744 aaKnown RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 TRIM28Q13263 835 aaKnown RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 GRAPQ13588 217 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 CDC37Q16543 378 aaPredicted RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 CYP4F22Q6NT55 531 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 KRT26Q7Z3Y9 468 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 GRAPLQ8TC17 118 aaPredicted RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 ZNF653Q96CK0 615 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 FAM84BQ96KN1 310 aaPredicted RBP18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 PLCB1Q9NQ66 1216 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 PARP2Q9UGN5 583 aa18.68■□□□□ 0.58
SLC1A4-201ENST00000234256 SLC8A3P57103 927 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 VPS52Q8N1B4 723 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 PPRC1Q5VV67 1664 aaKnown RBP18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 NCAPD2Q15021 1401 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 ARHGEF40Q8TER5 1519 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 QRICH2Q9H0J4 1663 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 CTDNEP1O95476 244 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 FMR1Q06787 632 aaKnown RBP eCLIP18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 DMP1Q13316 513 aaPredicted RBP18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 ALX1Q15699 326 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 CC2D1AQ6P1N0 951 aaPredicted RBP18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 ANO3Q9BYT9 981 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 STK36Q9NRP7 1315 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 GOLGA8IPA6NC78 632 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 GOLGA8JA6NMD2 632 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 POC1B-GALNT4F8VUJ3 575 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 CC2D2BQ6DHV5 1058 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 MCTP2Q6DN12 878 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 DNAJC17Q9NVM6 304 aaKnown RBP18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 CLNS1AP54105 237 aaKnown RBP18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 ANTXR2P58335 489 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 ITIH3Q06033 890 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 CLEC4GQ6UXB4 293 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 NT5C1BQ96P26 610 aa18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 UBE2TQ9NPD8 197 aaPredicted RBP18.67■□□□□ 0.58
SLC1A4-201ENST00000234256 ESYT3A0FGR9 886 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 PPP2R5EQ16537 467 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 TBC1D9BQ66K14 1250 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 CCDC13Q8IYE1 715 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 RSAD2Q8WXG1 361 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 USP31Q70CQ4 1352 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 A0A1B0GUA9 196 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 DDIT3P35638 169 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 POLGP54098 1239 aaPredicted RBP18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 GEN1Q17RS7 908 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms