RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ERVK-9P63128 1117 aa20.92■□□□□ 0.94
SNX17-201ENST00000233575 ERVK-24P63145 666 aa20.92■□□□□ 0.94
SNX17-201ENST00000233575 PKD2L1Q9P0L9 805 aa20.92■□□□□ 0.94
SNX17-201ENST00000233575 SLC45A1Q9Y2W3 748 aa20.92■□□□□ 0.94
SNX17-201ENST00000233575 C11orf57Q6ZUT1 292 aaPredicted RBP20.92■□□□□ 0.94
SNX17-201ENST00000233575 SLC5A5Q92911 643 aa20.92■□□□□ 0.94
SNX17-201ENST00000233575 KCNH7Q9NS40 1196 aa20.92■□□□□ 0.94
SNX17-201ENST00000233575 FBXO40Q9UH90 709 aa20.92■□□□□ 0.94
SNX17-201ENST00000233575 USP25Q9UHP3 1055 aa20.92■□□□□ 0.94
SNX17-201ENST00000233575 PSMD10O75832 226 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 NR3C2P08235 984 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 XRCC6P12956 609 aaKnown RBP eCLIP20.91■□□□□ 0.94
SNX17-201ENST00000233575 SETQ01105 290 aaPredicted RBP20.91■□□□□ 0.94
SNX17-201ENST00000233575 FSTL1Q12841 308 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 KRT79Q5XKE5 535 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 NCAPH2Q6IBW4 605 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 RGMBQ6NW40 437 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 KANK3Q6NY19 840 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 ANKRD13CQ8N6S4 541 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 NSUN6Q8TEA1 469 aaKnown RBP20.91■□□□□ 0.94
SNX17-201ENST00000233575 PYM1Q9BRP8 204 aaKnown RBP20.91■□□□□ 0.94
SNX17-201ENST00000233575 ZNF577Q9BSK1 485 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 PORCNQ9H237 461 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 BLZF1Q9H2G9 400 aa20.91■□□□□ 0.94
SNX17-201ENST00000233575 MRE11P49959 708 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 DPCR1Q3MIW9 517 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 LRCH2Q5VUJ6 765 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 VSIG10LQ86VR7 867 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 JADE2Q9NQC1 790 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 HOOK1Q9UJC3 728 aaKnown RBP20.9■□□□□ 0.94
SNX17-201ENST00000233575 EML1O00423 815 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 SLC25A27O95847 323 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 STX1AQ16623 288 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 OTOP1Q7RTM1 612 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 KCNK18Q7Z418 384 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 SMC1BQ8NDV3 1235 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 CALML4Q96GE6 196 aa20.9■□□□□ 0.94
SNX17-201ENST00000233575 TESPA1A2RU30 521 aaPredicted RBP20.89■□□□□ 0.93
SNX17-201ENST00000233575 IPO5O00410 1097 aaKnown RBP20.89■□□□□ 0.93
SNX17-201ENST00000233575 DPYDQ12882 1025 aa20.89■□□□□ 0.93
SNX17-201ENST00000233575 MTMR1Q13613 665 aa20.89■□□□□ 0.93
SNX17-201ENST00000233575 CUL4BQ13620 913 aa20.89■□□□□ 0.93
SNX17-201ENST00000233575 EFCC1Q9HA90 598 aa20.89■□□□□ 0.93
SNX17-201ENST00000233575 BLOC1S4Q9NUP1 217 aa20.89■□□□□ 0.93
SNX17-201ENST00000233575 TLL2Q9Y6L7 1015 aa20.89■□□□□ 0.93
SNX17-201ENST00000233575 PFASO15067 1338 aa20.89■□□□□ 0.93
SNX17-201ENST00000233575 IGF2BP3O00425 579 aaKnown RBP eCLIP20.88■□□□□ 0.93
SNX17-201ENST00000233575 CHMP2AO43633 222 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 MED24O75448 989 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 PGK2P07205 417 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 BCRP11274 1271 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 BMP6P22004 513 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 CCND2P30279 289 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 CCT6AP40227 531 aaKnown RBP20.88■□□□□ 0.93
SNX17-201ENST00000233575 SARSP49591 514 aaKnown RBP20.88■□□□□ 0.93
SNX17-201ENST00000233575 ITGB3BPQ13352 177 aaPredicted RBP20.88■□□□□ 0.93
SNX17-201ENST00000233575 WDR78Q5VTH9 848 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 NIPA1Q7RTP0 329 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 AGO4Q9HCK5 861 aaKnown RBP20.88■□□□□ 0.93
SNX17-201ENST00000233575 MAN1B1Q9UKM7 699 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 POTEB3A0JP26 581 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 DDX39AO00148 427 aaKnown RBP20.88■□□□□ 0.93
SNX17-201ENST00000233575 GAS7O60861 476 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 RGS20O76081 388 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 TMEM119Q4V9L6 283 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 NT5DC1Q5TFE4 455 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 POTEBQ6S5H4 581 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 GPRC5AQ8NFJ5 357 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 SPATA20Q8TB22 786 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 SMARCE1Q969G3 411 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 CDK5RAP3Q96JB5 506 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 KBTBD4Q9NVX7 518 aa20.88■□□□□ 0.93
SNX17-201ENST00000233575 SOWAHBA6NEL2 793 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 ATP9AO75110 1047 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 SLC10A3P09131 477 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 NLRP12P59046 1061 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 KIAA1217Q5T5P2 1943 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 FAM133AQ8N9E0 248 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 MAF1Q9H063 256 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 ANO10Q9NW15 660 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 ABT1Q9ULW3 272 aaKnown RBP20.87■□□□□ 0.93
SNX17-201ENST00000233575 FAM155AB1AL88 458 aaPredicted RBP20.87■□□□□ 0.93
SNX17-201ENST00000233575 POTEB2H3BUK9 544 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 DHX15O43143 795 aaKnown RBP20.87■□□□□ 0.93
SNX17-201ENST00000233575 ALDH5A1P51649 535 aaPredicted RBP20.87■□□□□ 0.93
SNX17-201ENST00000233575 PPP2R5CQ13362 524 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 DHX8Q14562 1220 aaKnown RBP20.87■□□□□ 0.93
SNX17-201ENST00000233575 L1TD1Q5T7N2 865 aaKnown RBP20.87■□□□□ 0.93
SNX17-201ENST00000233575 CATSPER3Q86XQ3 398 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 GTF3C2Q8WUA4 911 aaPredicted RBP20.87■□□□□ 0.93
SNX17-201ENST00000233575 CCDC34Q96HJ3 373 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 PARK7Q99497 189 aaKnown RBP20.87■□□□□ 0.93
SNX17-201ENST00000233575 UNC45AQ9H3U1 944 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 CBX8Q9HC52 389 aa20.87■□□□□ 0.93
SNX17-201ENST00000233575 SPATA31C1P0DKV0 1188 aa20.86■□□□□ 0.93
SNX17-201ENST00000233575 CYP4A11Q02928 519 aa20.86■□□□□ 0.93
SNX17-201ENST00000233575 SEMA3FQ13275 785 aa20.86■□□□□ 0.93
SNX17-201ENST00000233575 B3GNT9Q6UX72 402 aa20.86■□□□□ 0.93
SNX17-201ENST00000233575 LUZP1Q86V48 1076 aa20.86■□□□□ 0.93
SNX17-201ENST00000233575 DNERQ8NFT8 737 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms