RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CTSWP56202 376 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 CASC4Q6P4E1 433 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 ZNF579Q8NAF0 562 aaKnown RBP14.99□□□□□ -0.01
HCFC2-201ENST00000229330 NLRP7Q8WX94 980 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 ZNF148Q9UQR1 794 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 NFRKBQ6P4R8 1299 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 TTC16Q8NEE8 873 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 MLXIPQ9HAP2 919 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 GGA1Q9UJY5 639 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 COL4A3BPQ9Y5P4 624 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 UNC13BO14795 1591 aa14.99□□□□□ -0.01
HCFC2-201ENST00000229330 CDK12Q9NYV4 1490 aaPredicted RBP14.99□□□□□ -0.01
HCFC2-201ENST00000229330 PABPN1LA6NDY0 278 aaKnown RBP14.98□□□□□ -0.01
HCFC2-201ENST00000229330 GJB4Q9NTQ9 266 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 INTUQ9ULD6 942 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 CYP4F22Q6NT55 531 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 NME8Q8N427 588 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 LARP4BQ92615 738 aaKnown RBP14.98□□□□□ -0.01
HCFC2-201ENST00000229330 PCDHA12Q9UN75 941 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 TRPM1Q7Z4N2 1603 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 USP17L12C9JPN9 530 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 USP17L21D6R901 530 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 LMNB2Q03252 620 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 SPECC1L-ADORA2AF8WAN1 911 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 N4BP1O75113 896 aaKnown RBP14.98□□□□□ -0.01
HCFC2-201ENST00000229330 STK10O94804 968 aaKnown RBP14.98□□□□□ -0.01
HCFC2-201ENST00000229330 SASH1O94885 1247 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 SATB1Q01826 763 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 SGO2Q562F6 1265 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 TMCO4Q5TGY1 634 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 MAEAQ7L5Y9 396 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 TRIM42Q8IWZ5 723 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 RIN2Q8WYP3 895 aaPredicted RBP14.98□□□□□ -0.01
HCFC2-201ENST00000229330 MMS19Q96T76 1030 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 FUT8Q9BYC5 575 aa14.98□□□□□ -0.01
HCFC2-201ENST00000229330 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 CCDC93Q567U6 631 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 LRRC31Q6UY01 552 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ARPP21Q9UBL0 812 aaPredicted RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 A2ML1A8K2U0 1454 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 AFPP02771 609 aaKnown RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 EIF6P56537 245 aaKnown RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ESRRGP62508 458 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 CCNI2Q6ZMN8 369 aaPredicted RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 CARD10Q9BWT7 1032 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 PKD2L1Q9P0L9 805 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 EIF4E1BA6NMX2 242 aaKnown RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ENO4A6NNW6 628 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ATF7P17544 494 aaPredicted RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 IL17RAQ96F46 866 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 FGD4Q96M96 766 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 GPHNQ9NQX3 736 aaPredicted RBP14.97□□□□□ -0.01
HCFC2-201ENST00000229330 GRID2IPA4D2P6 1211 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 SLC30A9Q6PML9 568 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ARHGAP18Q8N392 663 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 SPATA4Q8NEY3 305 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 CCT6BQ92526 530 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 GDAQ9Y2T3 454 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 CRCPO75575 148 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 NR2F2P24468 414 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 BFSP1Q12934 665 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ANKRD20A4Q4UJ75 823 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ANKRD20A8PQ5CZ79 823 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ANKRD20A2Q5SQ80 823 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ANKRD20A1Q5TYW2 823 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 OSBP2Q969R2 916 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ATP8A2Q9NTI2 1148 aa14.97□□□□□ -0.01
HCFC2-201ENST00000229330 ERBB3P21860 1342 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 MYO1FO00160 1098 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 PRR29P0C7W0 189 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 CDC25AP30304 524 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 RAD23BP54727 409 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 LRRC41Q15345 812 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 ZBTB38Q8NAP3 1195 aaPredicted RBP14.96□□□□□ -0.01
HCFC2-201ENST00000229330 PNMA1Q8ND90 353 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 MORC4Q8TE76 937 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 FGGP02679 453 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 SNX1Q13596 522 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 SH2D3CQ8N5H7 860 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 SDR42E1Q8WUS8 393 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 ADAMTS1Q9UHI8 967 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 PCDHA4Q9UN74 947 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 RNF17Q9BXT8 1623 aaKnown RBP14.96□□□□□ -0.01
HCFC2-201ENST00000229330 ZWINTO95229 277 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 ARHGAP4P98171 946 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 RASGRP2Q7LDG7 609 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 JDP2Q8WYK2 163 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 LRRC1Q9BTT6 524 aa14.96□□□□□ -0.01
HCFC2-201ENST00000229330 TTC26A0AVF1 554 aa14.96□□□□□ -0.02
HCFC2-201ENST00000229330 INHBAP08476 426 aa14.96□□□□□ -0.02
HCFC2-201ENST00000229330 AZI2Q9H6S1 392 aa14.96□□□□□ -0.02
HCFC2-201ENST00000229330 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.96□□□□□ -0.02
HCFC2-201ENST00000229330 DYDC2Q96IM9 177 aa14.95□□□□□ -0.02
HCFC2-201ENST00000229330 ETNK1Q9HBU6 452 aa14.95□□□□□ -0.02
HCFC2-201ENST00000229330 NCK2O43639 380 aa14.95□□□□□ -0.02
HCFC2-201ENST00000229330 TRPA1O75762 1119 aa14.95□□□□□ -0.02
HCFC2-201ENST00000229330 PCCAP05165 728 aaPredicted RBP14.95□□□□□ -0.02
HCFC2-201ENST00000229330 CUL4BQ13620 913 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms